Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SNORA31.21-201ENST00000517180 77 ntBASIC2.55□□□□□ -2
RNF11Q9Y3C5 AC123904.3-201ENST00000547218 814 ntBASIC2.55□□□□□ -2
RNF11Q9Y3C5 SYF2P1-201ENST00000550658 413 ntBASIC2.55□□□□□ -2
RNF11Q9Y3C5 GTF2IP8-201ENST00000560687 584 ntBASIC2.55□□□□□ -2
RNF11Q9Y3C5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.55□□□□□ -2
RNF11Q9Y3C5 MTND4P34-201ENST00000572715 1371 ntBASIC2.55□□□□□ -2
RNF11Q9Y3C5 MIR3690-201ENST00000580266 75 ntBASIC2.55□□□□□ -2
RNF11Q9Y3C5 AL359715.4-201ENST00000606629 1436 ntBASIC2.55□□□□□ -2
RNF11Q9Y3C5 AC015726.3-201ENST00000624501 418 ntBASIC2.55□□□□□ -2
RNF11Q9Y3C5 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.55□□□□□ -2
RNF11Q9Y3C5 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.55□□□□□ -2
RNF11Q9Y3C5 SAGE4P-201ENST00000442271 3381 ntBASIC2.55□□□□□ -2
RNF11Q9Y3C5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RNF11Q9Y3C5 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC007256.1-201ENST00000392253 2765 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 GNG5P1-201ENST00000255500 204 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 EIF5P1-201ENST00000400019 1231 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 BTBD10P2-201ENST00000404779 676 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.54□□□□□ -2
RNF11Q9Y3C5 RPS20P25-201ENST00000412447 352 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 USP9YP20-201ENST00000419224 558 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC006946.1-201ENST00000429106 328 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 ARL5AP2-201ENST00000444698 533 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC012181.1-201ENST00000479895 423 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.54□□□□□ -2
RNF11Q9Y3C5 RNA5SP402-201ENST00000517148 110 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 AP003102.1-201ENST00000525638 661 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC115085.1-201ENST00000588924 229 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC011472.4-201ENST00000615848 491 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC090617.7-201ENST00000623952 126 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 AP001002.2-201ENST00000625137 386 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.54□□□□□ -2
RNF11Q9Y3C5 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.54□□□□□ -2
RNF11Q9Y3C5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF11Q9Y3C5 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 ZNF271P-202ENST00000465539 1970 ntBASIC2.54□□□□□ -2
RNF11Q9Y3C5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.53□□□□□ -2
RNF11Q9Y3C5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.53□□□□□ -2
RNF11Q9Y3C5 RNU6-317P-201ENST00000384031 107 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 MIR142-201ENST00000384835 87 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.53□□□□□ -2
RNF11Q9Y3C5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RNF11Q9Y3C5 BTF3P9-201ENST00000418784 283 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 AC241520.1-201ENST00000422654 1099 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 RPL7P44-201ENST00000424827 742 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.53□□□□□ -2
RNF11Q9Y3C5 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.53□□□□□ -2
RNF11Q9Y3C5 AC005189.1-201ENST00000431286 310 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 AC109583.1-201ENST00000432156 268 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 CYCSP32-201ENST00000440548 321 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 AC011816.1-201ENST00000441346 546 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 AL606490.8-201ENST00000441624 319 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.53□□□□□ -2
RNF11Q9Y3C5 snoU13.22-201ENST00000459428 104 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RNF11Q9Y3C5 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.53□□□□□ -2
RNF11Q9Y3C5 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RNF11Q9Y3C5 RN7SKP132-201ENST00000516001 208 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.53□□□□□ -2
RNF11Q9Y3C5 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.53□□□□□ -2
RNF11Q9Y3C5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.53□□□□□ -2
RNF11Q9Y3C5 MIR3200-201ENST00000580767 85 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 AC090616.5-202ENST00000582111 297 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.53□□□□□ -2
RNF11Q9Y3C5 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.53□□□□□ -2
RNF11Q9Y3C5 AL133393.1-201ENST00000603277 287 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 AC069304.3-201ENST00000603938 1084 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 AL161756.2-201ENST00000604597 246 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 AL392112.1-201ENST00000605115 829 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 AC113194.1-201ENST00000606037 500 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
RNF11Q9Y3C5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.53□□□□□ -2
RNF11Q9Y3C5 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.53□□□□□ -2
RNF11Q9Y3C5 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
RNF11Q9Y3C5 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 AL512283.1-201ENST00000606756 1384 ntBASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 RNVU1-3-201ENST00000364313 161 ntBASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 RNU6-673P-201ENST00000365084 104 ntBASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 SNORA9-201ENST00000384215 133 ntBASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 MIR9-1-201ENST00000385198 89 ntBASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 AL360182.1-201ENST00000397433 468 ntBASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 AL590290.1-201ENST00000405336 380 ntBASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 AC073310.1-201ENST00000423226 1033 ntBASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 AL590103.1-201ENST00000434488 307 ntBASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 AC105272.1-201ENST00000438604 198 ntBASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 TRIM60P18-201ENST00000441518 828 ntBASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF11Q9Y3C5 ARPC3P2-201ENST00000457786 533 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms