Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL139247.1-201ENST00000422768 325 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 GTF2IP23-201ENST00000423746 351 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC012497.1-201ENST00000429392 575 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 SETP8-201ENST00000435341 628 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 GTF2IP7-202ENST00000436677 309 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC093155.1-201ENST00000440164 826 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC112492.1-201ENST00000449607 712 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 SSXP4-201ENST00000451349 245 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 RN7SL323P-201ENST00000494712 295 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 RNU6-1261P-201ENST00000517194 104 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC007536.1-201ENST00000533382 349 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC125611.1-201ENST00000549563 229 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 MIR4474-201ENST00000579189 78 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AP001029.3-201ENST00000588063 596 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AL355810.1-201ENST00000614629 552 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC015967.1-201ENST00000619893 476 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC008264.2-201ENST00000610193 3731 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AP004289.2-201ENST00000444413 1457 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 OR5H2-201ENST00000355273 945 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 U3.11-201ENST00000364476 212 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 RNU6-213P-201ENST00000384051 104 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AL445189.1-201ENST00000405722 338 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 RNU4-65P-201ENST00000410473 140 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 HMGB3P23-201ENST00000414981 585 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 MTND4P3-201ENST00000417829 541 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 COX6CP17-201ENST00000421389 185 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AL591419.1-201ENST00000427423 339 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC079780.1-201ENST00000428259 207 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 SEPT7P5-201ENST00000434048 306 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 MTND4LP10-201ENST00000435146 291 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 YWHAZP7-201ENST00000436906 631 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 HMGN2P20-201ENST00000437531 273 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 RABEPKP1-201ENST00000440529 1026 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 VN1R10P-201ENST00000447106 875 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 USP9YP34-201ENST00000453983 808 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 RPL21P8-201ENST00000465083 535 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC092757.1-201ENST00000467293 467 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 MRPL49P2-201ENST00000521066 465 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC138915.2-201ENST00000569776 97 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC090079.2-201ENST00000575289 768 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 MIR5096-201ENST00000583713 70 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 SNORD84-203ENST00000584275 78 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AL391497.1-201ENST00000608671 547 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC005344.1-201ENST00000613391 459 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AC069209.1-201ENST00000619282 651 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 AP002371.2-201ENST00000624450 503 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 OR52H1-202ENST00000641796 1061 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms