Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.33□□□□□ -1.88
RNF6Q9Y252 RPS4XP2-201ENST00000458402 793 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
RNF6Q9Y252 RPL31P13-201ENST00000484151 370 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF6Q9Y252 CAB39P1-201ENST00000502277 460 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 AC020893.1-201ENST00000502452 580 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF6Q9Y252 WBP1LP4-201ENST00000505043 344 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 BOLA3P3-201ENST00000505182 232 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF6Q9Y252 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF6Q9Y252 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.33□□□□□ -1.88
RNF6Q9Y252 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF6Q9Y252 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF6Q9Y252 MTCYBP27-201ENST00000555160 670 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 MIR3200-201ENST00000580767 85 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF6Q9Y252 BNIP3P38-201ENST00000601117 544 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF6Q9Y252 AC073387.2-201ENST00000604797 784 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 AC124312.4-201ENST00000605533 310 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 RNU1-30P-201ENST00000606575 163 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 AC006329.2-201ENST00000611491 394 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 AL450489.1-201ENST00000612071 468 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 AC009318.4-201ENST00000620496 486 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 MTND2P41-201ENST00000637599 773 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF6Q9Y252 AC119674.1-207ENST00000641355 633 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF6Q9Y252 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF6Q9Y252 AC007656.2-201ENST00000624902 4547 ntBASIC3.33□□□□□ -1.88
RNF6Q9Y252 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.33□□□□□ -1.88
RNF6Q9Y252 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC068647.1-201ENST00000489539 2265 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF6Q9Y252 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF6Q9Y252 RNU6-1249P-201ENST00000363237 111 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 RNU6-657P-201ENST00000383904 107 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 RNU6-224P-201ENST00000384055 107 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 MTND4P3-201ENST00000417829 541 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 USP9YP21-201ENST00000420603 432 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 SDCBPP2-201ENST00000424643 885 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 MTCO1P3-201ENST00000429327 192 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC093155.1-201ENST00000440164 826 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 RPL21P23-201ENST00000446654 460 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 RPL23AP62-201ENST00000463396 453 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 RPL5P24-201ENST00000463742 885 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 PABPC1P3-201ENST00000469174 459 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC010285.1-201ENST00000470580 392 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 RN7SL442P-201ENST00000473804 320 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 LRRC6P1-201ENST00000532188 885 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC008127.2-201ENST00000549925 1075 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC023161.2-201ENST00000551218 780 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 SULT1C2P1-202ENST00000562418 459 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC010591.1-201ENST00000603941 649 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 AL160281.1-201ENST00000605307 311 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC018645.2-201ENST00000609151 472 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC022149.2-201ENST00000621061 203 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC243312.2-201ENST00000623340 601 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC026634.1-201ENST00000634369 198 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC244258.1-201ENST00000637553 1071 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 AC013437.2-201ENST00000639587 677 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 AP001350.1-201ENST00000601906 1524 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF6Q9Y252 AL513302.2-201ENST00000562313 1842 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF6Q9Y252 AF127577.6-201ENST00000623352 2191 ntBASIC3.32□□□□□ -1.88
RNF6Q9Y252 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF6Q9Y252 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF6Q9Y252 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF6Q9Y252 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF6Q9Y252 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF6Q9Y252 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF6Q9Y252 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF6Q9Y252 RNU6-707P-201ENST00000364647 95 ntBASIC3.31□□□□□ -1.88
RNF6Q9Y252 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
RNF6Q9Y252 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms