Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC084024.2-201ENST00000503480 791 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 OR10V3P-201ENST00000525712 725 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 DUXAP10-204ENST00000612052 616 ntBASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.53□□□□□ -1.36
SHROOM4Q9ULL8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 AC117529.2-201ENST00000512159 2068 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 AL133384.1-201ENST00000412744 351 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 USP9YP22-201ENST00000438971 294 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 RPL29P29-201ENST00000448725 423 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 AC097262.1-201ENST00000452559 548 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 SNORD108-201ENST00000459332 71 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 RPS26P3-201ENST00000470205 348 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 AC004057.1-201ENST00000485827 348 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 GTF2IP9-201ENST00000502460 301 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 UBE2V1P12-201ENST00000503954 474 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 AC113347.3-201ENST00000509113 148 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 FCF1P8-201ENST00000510322 597 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 RNU4-60P-201ENST00000517239 135 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 IGLVIV-53-201ENST00000520107 367 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 OR5AP1P-201ENST00000529730 940 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 BNIP3P40-201ENST00000596017 556 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 AC067852.7-201ENST00000623270 535 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 OFD1P6Y-202ENST00000451061 2724 ntBASIC6.52□□□□□ -1.37
SHROOM4Q9ULL8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AC087190.4-201ENST00000574616 8334 ntBASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 NANOGP6-201ENST00000429190 847 ntBASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AC093155.1-201ENST00000440164 826 ntBASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 COX6CP18-201ENST00000448769 222 ntBASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AC112492.1-201ENST00000449607 712 ntBASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 RPS3AP43-201ENST00000479743 781 ntBASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AC016065.2-201ENST00000514530 444 ntBASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AP006245.1-201ENST00000522549 120 ntBASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.51□□□□□ -1.37
SHROOM4Q9ULL8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 U3.39-201ENST00000408569 239 ntBASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 RAC1P8-201ENST00000427086 527 ntBASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 AL353705.1-201ENST00000433468 480 ntBASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 AL034418.1-201ENST00000448675 860 ntBASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 OR4A45P-201ENST00000529954 901 ntBASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 AC092470.1-201ENST00000546187 132 ntBASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 SNORD39.3-201ENST00000584451 71 ntBASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 AC106754.1-201ENST00000562632 1513 ntBASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 AC005183.1-201ENST00000603687 1979 ntBASIC6.5□□□□□ -1.37
SHROOM4Q9ULL8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 MTCO2P23-201ENST00000425216 680 ntBASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 AL356535.1-201ENST00000440335 398 ntBASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 RPL23AP16-201ENST00000441715 421 ntBASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 AC079776.3-201ENST00000450665 370 ntBASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 MTCO3P2-201ENST00000457365 171 ntBASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 AL390838.2-201ENST00000602394 274 ntBASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 OR4G3P-201ENST00000633500 913 ntBASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 NEAT1-202ENST00000501122 22743 ntBASIC6.49□□□□□ -1.37
SHROOM4Q9ULL8 AC018555.1-201ENST00000567548 1980 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms