Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RNU6-263P-201ENST00000363811 107 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 RNU6-629P-201ENST00000384061 103 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 RNU6-921P-201ENST00000384361 107 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 Y_RNA.493-201ENST00000384422 102 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 RNA5SP56-201ENST00000410277 118 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 BX890604.2-201ENST00000427883 474 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 VDAC1P3-201ENST00000434069 851 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 HMGB3P11-201ENST00000440127 604 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 TXNP1-201ENST00000441872 371 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 NAP1L1P3-201ENST00000462291 880 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 RN7SL863P-201ENST00000462370 296 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC008379.1-201ENST00000463655 464 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 RPL23AP44-201ENST00000482216 473 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 RPS4XP13-201ENST00000483219 789 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AP003385.6-201ENST00000531603 374 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 NIFKP8-201ENST00000560500 874 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC037471.2-201ENST00000564941 598 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AL669831.4-202ENST00000590817 238 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC011492.1-201ENST00000600023 315 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC026741.1-201ENST00000605892 482 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AL513477.2-201ENST00000607858 568 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC013468.1-201ENST00000608680 598 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC090425.2-201ENST00000608818 501 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 AC068722.2-201ENST00000618734 544 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 SGO1P1-201ENST00000603525 1447 ntBASIC3.41□□□□□ -1.86
CDH9Q9ULB4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH9Q9ULB4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CDH9Q9ULB4 MIR649-201ENST00000384843 97 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 MIR16-1-201ENST00000385271 89 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AL583834.1-201ENST00000406943 343 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 B3GNT2P1-201ENST00000434960 952 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AL034418.1-201ENST00000448675 860 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 RPL32P14-201ENST00000463196 378 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 RPL6P9-201ENST00000466502 859 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 RPS3AP43-201ENST00000479743 781 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 RPS4XP22-201ENST00000480755 780 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 MTCO3P44-201ENST00000510977 541 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 MIR3200-201ENST00000580767 85 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AP002906.1-201ENST00000603405 233 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AC011816.2-201ENST00000607089 556 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AC006023.2-201ENST00000609916 167 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 uc_338.25-201ENST00000613756 156 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AC018692.3-201ENST00000623929 123 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AL590396.4-201ENST00000636779 956 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 AC117529.2-201ENST00000512159 2068 ntBASIC3.4□□□□□ -1.87
CDH9Q9ULB4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH9Q9ULB4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AC010733.2-201ENST00000589496 5702 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 RNA5SP374-201ENST00000362939 125 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AP002088.1-201ENST00000382740 395 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 RNU6-339P-201ENST00000384310 107 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 RNU6-932P-201ENST00000391108 106 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 RPS15AP6-201ENST00000420703 385 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 RPL21P66-201ENST00000426566 466 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 HMGB1P12-201ENST00000438594 598 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 GXYLT1P1-201ENST00000446657 490 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH9Q9ULB4 HMGB1P22-201ENST00000505315 124 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 AC119751.1-201ENST00000513357 765 ntBASIC3.39□□□□□ -1.87
CDH9Q9ULB4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms