Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 AL158825.1-201ENST00000414735 521 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 RPL7P53-201ENST00000421245 739 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 HMGB1P15-201ENST00000453854 435 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 LINC00888-204ENST00000487386 421 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 OR4H12P-201ENST00000556269 907 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 MIR1273D-201ENST00000577266 86 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 AL445437.1-201ENST00000623157 3087 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 RPL9P32-201ENST00000464118 620 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.1□□□□□ -1.91
SCN11AQ9UI33 AC069234.5-201ENST00000611056 416 ntBASIC3.1□□□□□ -1.91
SCN11AQ9UI33 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SCN11AQ9UI33 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SCN11AQ9UI33 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.09□□□□□ -1.91
SCN11AQ9UI33 SEC63P1-201ENST00000425785 1258 ntBASIC3.09□□□□□ -1.91
SCN11AQ9UI33 AL390023.1-201ENST00000428836 262 ntBASIC3.09□□□□□ -1.91
SCN11AQ9UI33 USP9YP7-201ENST00000436723 430 ntBASIC3.09□□□□□ -1.91
SCN11AQ9UI33 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.09□□□□□ -1.91
SCN11AQ9UI33 USP9YP32-201ENST00000452432 430 ntBASIC3.09□□□□□ -1.91
SCN11AQ9UI33 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
SCN11AQ9UI33 OR4G11P-201ENST00000492842 939 ntBASIC3.09□□□□□ -1.91
SCN11AQ9UI33 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.09□□□□□ -1.91
SCN11AQ9UI33 AC021269.2-201ENST00000532318 330 ntBASIC3.09□□□□□ -1.91
SCN11AQ9UI33 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.09□□□□□ -1.91
SCN11AQ9UI33 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.09□□□□□ -1.91
SCN11AQ9UI33 AL136964.1-201ENST00000622038 2990 ntBASIC3.09□□□□□ -1.92
SCN11AQ9UI33 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
SCN11AQ9UI33 RNA5SP456-201ENST00000364002 114 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 SNORA41-201ENST00000384675 132 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 AC007064.1-201ENST00000412238 351 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 ATG3P1-201ENST00000419507 911 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 AC018634.1-201ENST00000437554 401 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 AL353705.4-201ENST00000449661 238 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 CFTRP1-201ENST00000456646 183 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 SEPT7P6-201ENST00000469999 1143 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 RPL21P99-201ENST00000480369 423 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 RN7SL283P-201ENST00000489055 303 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 AC092185.1-201ENST00000491371 97 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 AC009063.1-201ENST00000563342 702 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.08□□□□□ -1.92
SCN11AQ9UI33 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.08□□□□□ -1.92
SCN11AQ9UI33 XPOTP1-201ENST00000443317 2398 ntBASIC3.08□□□□□ -1.92
SCN11AQ9UI33 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AL513175.2-201ENST00000422071 443 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AC012498.1-201ENST00000424037 437 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AC011816.1-201ENST00000441346 546 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.07□□□□□ -1.92
SCN11AQ9UI33 NTAN1P1-201ENST00000603150 646 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.07□□□□□ -1.92
SCN11AQ9UI33 MIR6733-201ENST00000635723 61 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SCN11AQ9UI33 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AC004925.1-201ENST00000624256 2706 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.07□□□□□ -1.92
SCN11AQ9UI33 Y_RNA.118-201ENST00000363300 101 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 SNORA51.4-201ENST00000364993 124 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AC009302.1-201ENST00000417147 390 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 MTATP6P11-201ENST00000428071 670 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 COX6CP2-201ENST00000444980 225 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AC025181.1-201ENST00000477507 416 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 IGKV2-36-201ENST00000519999 223 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 ELOCP31-201ENST00000540463 467 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AC123904.3-201ENST00000547218 814 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AC016727.1-205ENST00000605437 569 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AC046143.2-201ENST00000609789 160 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AC004696.1-201ENST00000614345 607 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 MIR6766-201ENST00000622641 72 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 MIR1291-201ENST00000627649 87 ntBASIC3.07□□□□□ -1.92
SCN11AQ9UI33 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SCN11AQ9UI33 AC092326.2-201ENST00000624772 1561 ntBASIC3.06□□□□□ -1.92
SCN11AQ9UI33 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SCN11AQ9UI33 AC010733.2-201ENST00000589496 5702 ntBASIC3.06□□□□□ -1.92
SCN11AQ9UI33 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SCN11AQ9UI33 NCSTNP1-201ENST00000406229 144 ntBASIC3.06□□□□□ -1.92
SCN11AQ9UI33 AC007390.1-201ENST00000415722 356 ntBASIC3.06□□□□□ -1.92
SCN11AQ9UI33 AC093151.1-201ENST00000427711 313 ntBASIC3.06□□□□□ -1.92
SCN11AQ9UI33 ARF4P2-201ENST00000430209 526 ntBASIC3.06□□□□□ -1.92
SCN11AQ9UI33 Z99127.2-201ENST00000441426 334 ntBASIC3.06□□□□□ -1.92
SCN11AQ9UI33 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.06□□□□□ -1.92
SCN11AQ9UI33 AC009452.1-201ENST00000640823 606 ntBASIC3.06□□□□□ -1.92
SCN11AQ9UI33 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.06□□□□□ -1.92
SCN11AQ9UI33 MTND5P6-201ENST00000422338 1798 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms