Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC244505.5-201ENST00000443639 207 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 NANOGNBP1-201ENST00000448444 480 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 MTCO3P38-201ENST00000468910 766 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AL358832.1-201ENST00000497800 389 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC114981.1-201ENST00000503897 678 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 RNA5SP154-201ENST00000516193 111 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 RN7SKP96-201ENST00000516948 297 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AP002748.2-201ENST00000528671 348 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC068831.4-201ENST00000556118 109 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC008638.3-201ENST00000603341 463 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC091834.1-201ENST00000614543 472 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AL713922.2-201ENST00000619384 716 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AL139089.1-201ENST00000620372 975 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 C2orf27A-204ENST00000623058 969 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 AC006065.6-201ENST00000625201 545 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 CRYM-AS1-204ENST00000637983 556 ntBASIC4.54□□□□□ -1.68
DKK3Q9UBP4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
DKK3Q9UBP4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 GDI2P1-201ENST00000429312 1336 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 XIAPP3-201ENST00000312918 795 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 OR4A15-201ENST00000314706 1035 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 Y_RNA.88-201ENST00000363029 99 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 MIR181A1-201ENST00000385026 110 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 SNORA40.3-201ENST00000390964 122 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 RPL17P50-201ENST00000396131 546 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 USP9YP13-201ENST00000417797 480 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AL732292.1-201ENST00000426692 226 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 RPS12P10-201ENST00000427031 377 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 RPL37P1-201ENST00000432310 284 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 CEACAMP1-201ENST00000434624 1035 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 MTCO1P27-201ENST00000448269 226 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 RPL39P6-201ENST00000448289 150 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 NUTF2P7-201ENST00000453086 375 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 snoU109.1-201ENST00000459339 135 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 KLF3P2-201ENST00000465138 268 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC053481.1-201ENST00000467217 306 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC022034.3-201ENST00000471393 478 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC013356.1-201ENST00000489027 564 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 POU5F1P7-201ENST00000508759 541 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC026402.1-201ENST00000513642 170 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 DEFB108A-201ENST00000530110 222 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AP004247.1-201ENST00000531556 1289 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 MIR4277-201ENST00000578298 84 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 MIR4637-201ENST00000582405 84 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC091178.1-203ENST00000584586 279 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 PRELID3BP8-201ENST00000604148 295 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC115621.1-201ENST00000604653 858 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC110741.2-201ENST00000605278 268 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC090517.2-201ENST00000614966 680 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC034229.5-201ENST00000624258 185 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC093591.3-201ENST00000634516 308 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 OR5AK4P-201ENST00000635912 903 ntBASIC4.53□□□□□ -1.68
DKK3Q9UBP4 AC244258.1-201ENST00000637553 1071 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms