Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AL079343.1-201ENST00000572358 1771 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AL391994.1-201ENST00000254724 282 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 XIAPP3-201ENST00000312918 795 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AC007685.1-201ENST00000329806 452 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 RNA5SP322-201ENST00000363617 119 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 RNA5SP97-201ENST00000365006 84 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 RNU1-89P-201ENST00000384592 164 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 RNU6-253P-201ENST00000384730 105 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 SNORA11.1-201ENST00000408133 129 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 RPS15AP38-201ENST00000413110 372 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AC009518.2-201ENST00000418056 731 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AC091286.1-201ENST00000431233 461 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 RPL26P28-201ENST00000451325 435 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 USP9YP10-201ENST00000454868 628 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 BZW1P2-201ENST00000473537 826 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AC005726.1-201ENST00000494679 427 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AC068305.1-201ENST00000497406 726 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 HMGB1P21-201ENST00000502313 581 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 USP9YP5-201ENST00000511770 630 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 MIR2114-201ENST00000516645 80 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AP000790.1-201ENST00000528891 737 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 MIR4504-201ENST00000577413 92 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 MIR4458-201ENST00000578872 75 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AL354976.1-201ENST00000613843 387 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AC103858.2-201ENST00000621471 543 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 AC073530.2-201ENST00000623987 261 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 EXOC5P1-201ENST00000510543 1969 ntBASIC4.38□□□□□ -1.71
HDAC6Q9UBN7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 MTCO1P14-201ENST00000441695 1559 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 SNORA4.1-201ENST00000364263 144 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 Y_RNA.333-201ENST00000365274 102 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 RNU6-761P-201ENST00000384148 107 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AL138878.1-201ENST00000405131 347 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AL023807.1-201ENST00000407932 359 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AL593851.1-201ENST00000426171 157 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC087650.1-201ENST00000431445 468 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AL591503.2-201ENST00000442314 1005 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 RPL23AP35-201ENST00000451906 501 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 TRBV26-201ENST00000456572 344 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 RPL30P6-201ENST00000475925 342 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC147055.4-201ENST00000504399 745 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC104057.1-201ENST00000515547 497 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 RNA5SP216-201ENST00000516111 123 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 SNORA70.14-201ENST00000516205 110 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 SCARNA14-201ENST00000516903 136 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC026403.1-201ENST00000518938 295 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 Z94722.1-201ENST00000604328 474 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC004223.4-201ENST00000612426 332 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC005344.1-201ENST00000613391 459 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AL139418.1-201ENST00000613613 177 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC122133.1-201ENST00000613964 233 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AL034408.1-202ENST00000636088 415 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AP003399.1-201ENST00000637534 361 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms