Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RN7SL101P-201ENST00000496350 279 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC100770.1-201ENST00000532310 322 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC007424.1-203ENST00000554613 687 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 TPRKBP2-201ENST00000565969 475 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 MIR3146-201ENST00000580367 79 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AL031176.1-201ENST00000604554 466 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC073534.2-201ENST00000620377 381 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC112204.3-201ENST00000623822 332 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AL159972.1-201ENST00000625150 448 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 RNU5E-1-201ENST00000362477 120 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 SNORA74A-201ENST00000364089 198 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 MIR124-3-201ENST00000384866 87 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 RNU11-4P-201ENST00000391149 133 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 U3.30-201ENST00000391308 210 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 GSTA9P-201ENST00000406231 611 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 MTND3P17-201ENST00000416968 344 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 EIF1P1-201ENST00000421436 341 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AL121776.1-201ENST00000429337 372 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC104850.1-201ENST00000435940 476 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 FTH1P1-201ENST00000437933 532 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 RAC1P7-201ENST00000445367 377 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC079448.1-201ENST00000449377 373 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AL121877.1-201ENST00000453704 622 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AL359385.1-201ENST00000456509 365 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC004924.1-201ENST00000480160 781 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC109462.1-201ENST00000491087 368 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC010587.1-201ENST00000505809 469 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC106872.4-201ENST00000510050 523 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 RNU1-6P-201ENST00000516290 144 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 MED28P5-201ENST00000528254 438 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 TOMM20P2-201ENST00000540082 421 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 ZNF519P2-201ENST00000557032 169 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC087481.2-201ENST00000565492 330 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AL121834.1-201ENST00000572284 509 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC012669.1-201ENST00000603209 283 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AL139286.1-201ENST00000604465 483 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AL512329.2-201ENST00000607350 548 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AF250324.2-201ENST00000608299 610 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AC007497.1-201ENST00000610421 561 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AL592295.2-201ENST00000612578 206 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 SNX18P1Y-201ENST00000616231 511 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 U4.5-201ENST00000617137 123 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AL158209.2-201ENST00000619266 216 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 AL049767.1-202ENST00000637826 242 ntBASIC4.67□□□□□ -1.66
MKS1Q9NXB0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
MKS1Q9NXB0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms