Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 COL6A4P2-205ENST00000509855 506 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 PHBP14-201ENST00000512887 367 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 IGJP1-201ENST00000522682 475 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 AP001636.2-201ENST00000525517 696 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 AC095031.1-201ENST00000623685 672 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 AL732372.2-225ENST00000642124 456 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 AL645937.1-201ENST00000641739 1652 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 MAPK10-362ENST00000641864 4484 ntBASIC3.45□□□□□ -1.86
TM9SF3Q9HD45 ZNF542P-204ENST00000482727 1305 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 MTND4LP20-201ENST00000402379 270 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 TRIAP1P1-201ENST00000427062 225 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AL158071.1-201ENST00000430315 461 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 RABEPKP1-201ENST00000440529 1026 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AC002542.1-201ENST00000440683 193 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AL929288.2-201ENST00000446368 407 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 RPL36AP33-201ENST00000450395 310 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AC087312.1-201ENST00000471411 480 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 GAPDHP39-201ENST00000481866 979 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AC098799.1-201ENST00000504752 800 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 SETP12-201ENST00000514068 805 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 RNU6-1102P-201ENST00000516149 96 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 TGIF1P1-201ENST00000558095 802 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AL133393.1-201ENST00000603277 287 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 KATNBL1P5-201ENST00000605015 517 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AL451074.6-201ENST00000608512 729 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AP004247.3-201ENST00000608682 624 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AC103988.1-201ENST00000566382 2177 ntBASIC3.44□□□□□ -1.86
TM9SF3Q9HD45 AC244517.1-201ENST00000606030 2086 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 RNU6-989P-201ENST00000362756 107 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 RNA5SP42-201ENST00000364278 115 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 TAF9BP1-201ENST00000396646 746 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 SNORA11.2-201ENST00000408318 127 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 RN7SKP111-201ENST00000410349 271 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 RNU6-1077P-201ENST00000410506 102 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC019070.1-201ENST00000415008 1024 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 RPL21P32-201ENST00000419877 477 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AL512649.1-201ENST00000428997 581 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 MTND4P15-201ENST00000437913 1033 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC091862.1-201ENST00000438016 1100 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC074367.1-201ENST00000438685 1125 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 RPL12P26-201ENST00000452430 487 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AL445669.2-201ENST00000454425 421 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 SNORA59A-201ENST00000459326 152 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC010401.1-201ENST00000463867 348 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AL136126.1-201ENST00000473603 402 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 FCF1P3-201ENST00000496394 590 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC093331.1-201ENST00000521474 169 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 UBE2NP1-201ENST00000545592 458 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC011602.1-201ENST00000546484 331 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AL391156.1-201ENST00000554965 554 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC087481.2-201ENST00000565492 330 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC106734.1-201ENST00000568646 663 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 BPTFP1-201ENST00000579209 492 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AL606834.2-201ENST00000602954 668 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC073387.2-201ENST00000604797 784 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC008962.1-201ENST00000605729 304 ntBASIC3.43□□□□□ -1.86
TM9SF3Q9HD45 AC002076.2-201ENST00000617362 122 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms