Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL049737.1-201ENST00000413920 1403 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 MIR148B-201ENST00000362252 99 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 RNU6-619P-201ENST00000365146 108 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 RNU6-413P-201ENST00000384115 107 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 SNORD116-2-201ENST00000384274 95 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 SNORD116-6-201ENST00000384711 96 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC007066.1-201ENST00000392902 381 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 RPL7P44-201ENST00000424827 742 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC115115.1-201ENST00000449927 248 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC103987.1-201ENST00000473394 348 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC117522.2-201ENST00000510049 657 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC008837.2-201ENST00000513076 418 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 RNU5A-4P-201ENST00000516588 111 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 RN7SKP116-201ENST00000516902 319 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC007991.1-201ENST00000522680 631 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 MIR5685-201ENST00000579080 79 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC067852.3-201ENST00000589177 561 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC080013.3-201ENST00000606839 578 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC243756.2-201ENST00000618406 463 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC004943.3-201ENST00000624116 600 ntBASIC4.09□□□□□ -1.75
UPF2Q9HAU5 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UPF2Q9HAU5 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
UPF2Q9HAU5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 Y_RNA.169-201ENST00000363745 96 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 Y_RNA.192-201ENST00000363977 102 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 OR52E6-202ENST00000379946 954 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 PTMAP5-201ENST00000393073 333 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 HNRNPDP2-201ENST00000406475 478 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 MTND1P32-201ENST00000433043 938 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC023347.2-201ENST00000433994 462 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 RPL23AP76-201ENST00000441860 458 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 PPIAP3-201ENST00000450588 505 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 U3.44-201ENST00000458938 192 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC015724.1-201ENST00000478577 156 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC087373.1-201ENST00000524920 491 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 OR4R3P-201ENST00000525084 838 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 DCAF13P3-201ENST00000561147 1334 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC022662.1-201ENST00000580252 331 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AL391497.1-201ENST00000608671 547 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC109454.4-201ENST00000623411 649 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC026422.1-201ENST00000623961 452 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC016717.3-201ENST00000624730 554 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AC087821.2-201ENST00000637086 450 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 MIR1322-201ENST00000638013 71 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 AL645937.1-201ENST00000641739 1652 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 ZNF663P-202ENST00000641770 1131 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 USP8P1-201ENST00000494673 3183 ntBASIC4.08□□□□□ -1.76
UPF2Q9HAU5 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC025263.3-201ENST00000622965 1396 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms