Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 RNA5SP383-201ENST00000362934 120 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC234772.1-201ENST00000377927 937 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AL139098.1-201ENST00000407291 389 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 PTGES3P2-201ENST00000407942 482 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 BX890604.2-201ENST00000427883 474 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 RPL31P54-201ENST00000429803 370 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC091286.1-201ENST00000431233 461 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 CST9LP2-201ENST00000437612 320 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC122718.1-201ENST00000439448 744 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 Z99127.3-201ENST00000448158 395 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 RPL26P28-201ENST00000451325 435 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC008379.1-201ENST00000463655 464 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 HMGB1P25-201ENST00000468402 607 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC096751.1-202ENST00000502691 1067 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC021146.5-201ENST00000503544 545 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 MLLT10P2-201ENST00000506434 249 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 OR4P1P-201ENST00000530808 1136 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC006518.1-201ENST00000541449 943 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AL845331.3-202ENST00000562856 261 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 MIR5186-201ENST00000577504 120 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 MIR3922-201ENST00000585192 84 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 AC118273.1-201ENST00000525324 3006 ntBASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 SGO1P2-201ENST00000429458 1589 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 RNU6-353P-201ENST00000364266 108 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 RNU6-805P-201ENST00000365643 106 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 RNU6-1074P-201ENST00000383995 104 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 U6.112-201ENST00000384129 70 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 RNU1-101P-201ENST00000391171 127 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 SNORA48.8-201ENST00000391324 134 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 PTMAP2-201ENST00000397627 327 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AL354719.1-201ENST00000406535 843 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 RNA5SP293-201ENST00000410527 113 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 TAF13P2-201ENST00000416876 286 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC079780.1-201ENST00000428259 207 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC005345.1-201ENST00000431868 217 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 HMGN2P31-201ENST00000432430 273 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AL590762.3-201ENST00000436372 640 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 ATP5C1P1-201ENST00000441945 895 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AL050341.1-201ENST00000447743 313 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 PLGLA-201ENST00000465668 449 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC093663.1-201ENST00000497190 394 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC093767.1-201ENST00000504523 156 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 MTND4LP22-201ENST00000508209 276 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 COL6A4P2-205ENST00000509855 506 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 TXNP6-201ENST00000510190 310 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 SNORA31.8-201ENST00000516327 108 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 ARL2BPP5-201ENST00000523141 481 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 SNRPGP16-201ENST00000533275 226 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 COX6CP3-201ENST00000580869 223 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 MIR4276-201ENST00000584832 70 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC002487.1-201ENST00000604565 994 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC124312.4-201ENST00000605533 310 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC016877.3-201ENST00000606778 504 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC092354.2-201ENST00000607786 514 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC034229.5-201ENST00000624258 185 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms