Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 HMGB3P16-201ENST00000508037 287 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AC078899.5-201ENST00000612475 178 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 uc_338.9-201ENST00000617424 182 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AC002550.2-201ENST00000621246 394 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AL732618.1-201ENST00000623251 301 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AL445487.1-201ENST00000415694 1580 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 USP9YP4-201ENST00000424401 1745 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.19□□□□□ -1.58
BCAS3Q9H6U6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 OR56B2P-202ENST00000641377 2453 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 RPL23AP32-201ENST00000395315 459 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AL356432.1-201ENST00000405809 419 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 RNU6-373P-201ENST00000411247 98 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 RPL17P36-201ENST00000420302 549 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AC234779.1-201ENST00000425910 285 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 RSL24D1P6-201ENST00000426934 401 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 MTCO3P21-201ENST00000430791 643 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 RPL7P54-201ENST00000438336 674 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 RPL23AP93-201ENST00000440847 484 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AL136380.1-201ENST00000447970 162 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AC011276.1-201ENST00000469688 323 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AC103987.1-201ENST00000473394 348 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 NIP7P2-201ENST00000485801 544 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AC093278.1-201ENST00000494700 600 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AC083829.1-201ENST00000503756 657 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 COX6CP8-201ENST00000522620 226 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AC122134.1-201ENST00000565664 1104 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AP001429.1-201ENST00000602568 530 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AL161729.3-201ENST00000603533 673 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AC011468.4-201ENST00000603942 409 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 OR2L1P-202ENST00000641567 1023 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 AL391684.1-202ENST00000641293 1636 ntBASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
BCAS3Q9H6U6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 RPL23AP57-201ENST00000332361 466 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 RNU1-83P-201ENST00000363426 164 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 RN7SKP27-201ENST00000410684 333 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 TPMTP2-201ENST00000414372 726 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AC008280.1-201ENST00000418851 412 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 RAD23BP1-201ENST00000421404 1227 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 RPL22P17-201ENST00000438729 315 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 FHP1-201ENST00000442741 703 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 RPL31P50-201ENST00000471002 296 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 SNORA19.2-201ENST00000516013 114 ntBASIC5.17□□□□□ -1.58
BCAS3Q9H6U6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms