Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 RPL32P23-201ENST00000397237 405 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC110754.1-201ENST00000399740 601 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 TMSB4XP8-201ENST00000402089 135 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 RNA5SP317-201ENST00000410176 116 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 RNA5SP311-201ENST00000411290 116 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AL133384.1-201ENST00000412744 351 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 TMSB4XP6-201ENST00000415187 135 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 RPS7P15-201ENST00000415804 584 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 TMSB4XP1-201ENST00000424567 135 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 MTCO2P1-201ENST00000424648 477 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC000041.1-201ENST00000439655 175 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AL592437.1-201ENST00000443781 492 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 SEPT14P24-201ENST00000447236 180 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 NECAP1P2-201ENST00000455668 727 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 RPL21P10-201ENST00000463521 490 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC006483.1-201ENST00000487308 313 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 RNA5SP315-201ENST00000516340 116 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 RNA5SP468-201ENST00000516782 93 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 RNA5SP312-201ENST00000517068 116 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 RNU6-334P-201ENST00000517072 102 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC113192.3-201ENST00000529152 742 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 MIR2682-201ENST00000580305 110 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC131902.3-201ENST00000611767 581 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AL020991.1-201ENST00000612314 373 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AL162574.2-201ENST00000614618 657 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 Z99129.2-201ENST00000619967 314 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC092650.2-201ENST00000619984 902 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AL136164.4-201ENST00000625013 2135 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 AC244517.1-201ENST00000606030 2086 ntBASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLIRPQ9GZT3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
SLIRPQ9GZT3 API5P2-201ENST00000397055 1498 ntBASIC2.71□□□□□ -1.97
SLIRPQ9GZT3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.71□□□□□ -1.97
SLIRPQ9GZT3 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.71□□□□□ -1.97
SLIRPQ9GZT3 DBF4P1-201ENST00000412976 1892 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 RNU6-582P-201ENST00000362989 107 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 RNU6-207P-201ENST00000384137 107 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 RNU6-575P-201ENST00000411326 105 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 FCF1P2-201ENST00000415284 583 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 MTCO3P12-201ENST00000416718 547 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 RPL18P10-201ENST00000425606 538 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AL117339.2-201ENST00000430475 180 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AC005345.1-201ENST00000431868 217 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 OR4C10P-201ENST00000434991 931 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 RPL36AP6-201ENST00000435770 321 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 NDUFA5P7-201ENST00000452914 242 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 snoU13.4-201ENST00000458916 104 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 RPL7P19-201ENST00000469948 618 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 RPS27AP1-201ENST00000475545 471 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AC091860.1-201ENST00000505723 432 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AC010460.1-201ENST00000507087 466 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AC010198.2-201ENST00000550612 259 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 AGGF1P6-201ENST00000569213 976 ntBASIC2.71□□□□□ -1.98
SLIRPQ9GZT3 MIR4666A-201ENST00000580160 79 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms