Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
PCDH11YQ9BZA8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 OR51A3P-201ENST00000413596 924 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 C1DP1-201ENST00000426049 402 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AL031736.2-201ENST00000426573 787 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 USP9YP24-201ENST00000434374 697 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 OR10R1P-201ENST00000441524 1141 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 USP9YP17-201ENST00000444617 696 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 HMGB3P6-201ENST00000444896 598 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 NPM1P13-201ENST00000452663 865 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AC069528.1-202ENST00000482888 637 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 RPL7P47-201ENST00000497299 556 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 RFPL1S-203ENST00000539579 330 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AC068446.3-201ENST00000555285 382 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 MIR4666A-201ENST00000580160 79 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 RPL12P50-201ENST00000603116 116 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AL583856.2-201ENST00000606298 543 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AP000238.1-201ENST00000608759 426 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AC010975.3-201ENST00000618727 978 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 AL078595.3-201ENST00000623815 1166 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 OR1S1-201ENST00000624470 978 ntBASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH11YQ9BZA8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 OR1L1-202ENST00000373686 1083 ntBASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 RNU6-272P-201ENST00000411028 104 ntBASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 MTCO2P17-201ENST00000424336 677 ntBASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 SETP5-201ENST00000437270 562 ntBASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 RPS27P23-201ENST00000487608 251 ntBASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 NDUFB9P3-201ENST00000521269 501 ntBASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 MIR4738-201ENST00000579134 87 ntBASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 AC091488.1-201ENST00000604239 660 ntBASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 AP004247.3-201ENST00000608682 624 ntBASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 OR6R2P-201ENST00000609216 300 ntBASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDH11YQ9BZA8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AC095050.2-201ENST00000510748 1458 ntBASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 RN7SKP220-201ENST00000410611 288 ntBASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 ELOCP11-201ENST00000436690 332 ntBASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 ELOCP16-201ENST00000444494 332 ntBASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AC233982.1-201ENST00000451247 436 ntBASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AC096992.1-201ENST00000459808 709 ntBASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AC009812.2-201ENST00000517657 457 ntBASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 OR8K4P-201ENST00000534608 872 ntBASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 MTND1P24-201ENST00000552175 861 ntBASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDH11YQ9BZA8 AP005205.1-201ENST00000563503 508 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms