Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL451044.1-201ENST00000604867 238 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC004853.1-201ENST00000604902 698 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AL049539.1-201ENST00000611964 459 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC072046.2-201ENST00000618366 268 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 MIR7154-201ENST00000620673 73 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC040168.1-201ENST00000623594 991 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC091925.2-201ENST00000625059 256 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC010149.2-201ENST00000637608 315 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 AC099654.12-201ENST00000639868 649 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 Z73965.1-201ENST00000623412 2297 ntBASIC4.46□□□□□ -1.7
TRIM54Q9BYV2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC095050.2-201ENST00000510748 1458 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 Y_RNA.41-201ENST00000362646 102 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 Y_RNA.46-201ENST00000362695 102 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 SNORD51-201ENST00000384320 80 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 Y_RNA.516-201ENST00000384541 124 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 RNU6-821P-201ENST00000390995 107 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 HSPD1P16-201ENST00000402302 394 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 RPL7P25-201ENST00000404151 721 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 C1DP2-201ENST00000418167 426 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 MTCYBP24-201ENST00000420387 1106 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AL590762.4-201ENST00000425885 253 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 UBE2V1P13-201ENST00000436983 439 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AL772161.1-201ENST00000439130 476 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 RN7SL826P-201ENST00000479724 288 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC021382.1-201ENST00000483523 359 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 RPL9P33-201ENST00000484311 566 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 OR4P1P-201ENST00000530808 1136 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 EEF1B2P4-201ENST00000551398 348 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 SETP2-201ENST00000553886 926 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC034268.2-201ENST00000571784 482 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 MTND6P33-201ENST00000571794 183 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 BPIFA4P-203ENST00000603168 689 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC087283.1-201ENST00000604029 1074 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC079597.1-201ENST00000624306 508 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC099654.13-201ENST00000639774 207 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 FARSBP1-201ENST00000435808 1778 ntBASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
TRIM54Q9BYV2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 NXPH1-205ENST00000602349 1953 ntBASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 AC090229.1-201ENST00000590983 1609 ntBASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 AC105074.1-201ENST00000623380 3095 ntBASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 RNA5SP28-201ENST00000363841 119 ntBASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 RNY4P34-201ENST00000364779 95 ntBASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 RNU6-359P-201ENST00000365466 108 ntBASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 RN7SKP106-201ENST00000410832 272 ntBASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 FCF1P9-201ENST00000412546 282 ntBASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM54Q9BYV2 AC127526.1-201ENST00000417526 366 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms