Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 DMD-205ENST00000359836 7339 ntTSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 RNU5E-8P-201ENST00000363502 116 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 SNORA73.2-201ENST00000364946 201 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 RNU6-806P-201ENST00000365147 105 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 RNU6-98P-201ENST00000384173 107 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 MIR659-201ENST00000384963 97 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 MIR551A-201ENST00000385042 96 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 TAF9BP2-201ENST00000400856 499 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 MTND4LP21-201ENST00000415303 295 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 AL606495.1-201ENST00000422100 813 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 RPS27AP8-201ENST00000452665 445 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 DNAJC19P8-201ENST00000452887 259 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 RPL9P33-201ENST00000484311 566 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 RNU6-1278P-201ENST00000516130 107 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 RNU6-126P-201ENST00000516685 103 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 AP000916.1-201ENST00000533869 835 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 PSMB7P1-201ENST00000556349 514 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 AC092868.3-201ENST00000560515 784 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 AC025048.6-202ENST00000627667 438 ntBASIC1.53□□□□□ -2.17
HMCN1Q96RW7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
HMCN1Q96RW7 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL021368.2-201ENST00000606125 5352 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 Y_RNA.180-201ENST00000363867 113 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MIR128-1-201ENST00000384921 82 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL133264.1-201ENST00000407157 562 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MIR1261-201ENST00000408659 82 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC096921.1-201ENST00000411661 375 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC114482.1-201ENST00000418010 247 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RPS29P17-201ENST00000430795 166 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 Z85994.2-201ENST00000434327 452 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RPL32P28-201ENST00000443577 397 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 FGF7P6-202ENST00000451282 293 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RPL23AP3-201ENST00000453844 468 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 OR6K1P-201ENST00000456766 971 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC106872.3-201ENST00000495104 446 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC046134.1-201ENST00000514454 666 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC093027.1-201ENST00000546698 429 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 NMNAT1P1-201ENST00000554095 876 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC110588.1-201ENST00000559699 137 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC012254.4-201ENST00000588843 273 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC010620.2-201ENST00000600135 313 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL033523.1-201ENST00000605153 153 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC112503.2-201ENST00000609005 552 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC007998.5-201ENST00000622938 237 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms