Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC110775.1-201ENST00000513721 462 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 RNU6-714P-201ENST00000516963 103 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 SNORA31.20-201ENST00000517111 133 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC021006.3-201ENST00000530771 192 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AP001880.2-201ENST00000538233 448 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC018630.1-201ENST00000541376 925 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC008033.2-201ENST00000542626 177 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC063950.1-201ENST00000552036 308 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 GNRHR2P1-201ENST00000555315 631 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 PSMB7P1-201ENST00000556349 514 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 PCMTD1P2-201ENST00000565017 355 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 XIAPP1-201ENST00000603162 600 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC011451.2-201ENST00000604303 598 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC121247.2-201ENST00000604776 136 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC114878.2-201ENST00000604863 1251 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AL049634.3-201ENST00000604968 457 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC107214.2-201ENST00000608204 634 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC103710.4-201ENST00000609301 899 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AL512624.1-201ENST00000613638 469 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AL590099.1-201ENST00000615276 138 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC022079.1-201ENST00000621546 602 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 AC092628.2-201ENST00000622492 339 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 U3.53-201ENST00000628922 216 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 MIR3974-201ENST00000637126 96 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 FP325313.1-201ENST00000638228 703 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 CR383658.2-201ENST00000547576 1525 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.94□□□□□ -1.78
NR1H4Q96RI1 CR381670.1-201ENST00000624291 1693 ntBASIC3.94□□□□□ -1.78
NR1H4Q96RI1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 MTND4P16-201ENST00000466108 1367 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 SNORA51.2-201ENST00000364595 132 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 SNORA71.2-201ENST00000364941 134 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 RNU6-1207P-201ENST00000384343 107 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 RNU2-47P-201ENST00000410649 186 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 RNU6-920P-201ENST00000410926 92 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 COX6CP17-201ENST00000421389 185 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 RPS12P10-201ENST00000427031 377 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 MTND1P30-201ENST00000441241 901 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC010285.1-201ENST00000470580 392 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 RN7SL481P-201ENST00000477764 299 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 HMGB1P36-201ENST00000487709 576 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC093278.1-201ENST00000494700 600 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC004069.2-201ENST00000505438 1114 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 OR5M14P-201ENST00000506803 618 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 RNU6-1095P-201ENST00000516148 108 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC109635.4-202ENST00000531666 412 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC013828.2-201ENST00000532487 235 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AL109766.1-201ENST00000555080 552 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC022146.1-201ENST00000595307 847 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC012669.1-201ENST00000603209 283 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AL445222.1-201ENST00000607259 628 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC097468.3-201ENST00000607956 456 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC092653.1-201ENST00000608509 531 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 TUG1_1.1-201ENST00000610654 145 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 MIR6891-201ENST00000618788 93 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AL356266.1-201ENST00000623311 483 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC112694.2-201ENST00000623697 768 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
NR1H4Q96RI1 AP001350.1-201ENST00000601906 1524 ntBASIC3.93□□□□□ -1.78
NR1H4Q96RI1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms