Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 AL096701.2-201ENST00000416920 238 ntBASIC2.94□□□□□ -1.94
CCDC42Q96M95 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 RPL6P5-201ENST00000445678 828 ntBASIC2.94□□□□□ -1.94
CCDC42Q96M95 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 AL136126.1-201ENST00000473603 402 ntBASIC2.94□□□□□ -1.94
CCDC42Q96M95 AP001025.2-201ENST00000490908 477 ntBASIC2.94□□□□□ -1.94
CCDC42Q96M95 AL024509.2-201ENST00000493462 493 ntBASIC2.94□□□□□ -1.94
CCDC42Q96M95 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC42Q96M95 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 AC109635.4-202ENST00000531666 412 ntBASIC2.94□□□□□ -1.94
CCDC42Q96M95 HSPE1P20-201ENST00000538133 289 ntBASIC2.94□□□□□ -1.94
CCDC42Q96M95 AC024153.1-201ENST00000603103 365 ntBASIC2.94□□□□□ -1.94
CCDC42Q96M95 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC42Q96M95 AL122126.1-201ENST00000546905 1318 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CCDC42Q96M95 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC42Q96M95 RNA5SP374-201ENST00000362939 125 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 DEFB109C-201ENST00000382575 264 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 DEFB109B-201ENST00000382656 264 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 AL138885.1-201ENST00000405921 675 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 RNA5SP492-201ENST00000411330 114 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 RPS3AP25-201ENST00000411660 793 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 RAP1BP1-201ENST00000412709 553 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 YME1L1P1-201ENST00000429435 297 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC42Q96M95 XKRYP6-201ENST00000440468 1116 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 XKRYP3-201ENST00000442113 1116 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 ELOCP13-201ENST00000443934 329 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 HMGB1P48-201ENST00000446155 598 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 VN1R34P-201ENST00000447387 883 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 ST13P20-201ENST00000447996 1065 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 AC140076.1-201ENST00000449897 361 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC42Q96M95 HMGN1P8-201ENST00000463578 288 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 AC008571.1-201ENST00000467232 300 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 AC104689.1-201ENST00000473356 768 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC42Q96M95 HMGB1P22-201ENST00000505315 124 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 AC111000.2-201ENST00000507775 550 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 RNU1-61P-201ENST00000516107 151 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 SNORA74D-201ENST00000516404 141 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 RNU6-826P-201ENST00000516827 104 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC42Q96M95 AC069200.1-201ENST00000609511 323 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 AL590282.1-201ENST00000610379 1136 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 AC084757.4-201ENST00000616350 526 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 AP004607.9-201ENST00000618202 316 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC42Q96M95 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CCDC42Q96M95 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC42Q96M95 PABPC1P7-201ENST00000413177 1513 ntBASIC2.93□□□□□ -1.94
CCDC42Q96M95 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC42Q96M95 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC42Q96M95 MAPK10-322ENST00000641485 4530 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC42Q96M95 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 ZNF37BP-203ENST00000452306 1352 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CCDC42Q96M95 SNORA71.3-201ENST00000362582 128 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 VTRNA1-1-201ENST00000363120 99 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC42Q96M95 HMGN2P35-201ENST00000412164 270 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 RPS20P25-201ENST00000412447 352 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 RPL17P49-201ENST00000443728 411 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC42Q96M95 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC42Q96M95 MTCYBP37-201ENST00000510642 1133 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 AC008562.1-201ENST00000521763 330 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 AC104115.2-201ENST00000523026 687 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 AP004371.1-201ENST00000525240 214 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 POLR2KP1-201ENST00000553226 168 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC42Q96M95 BX664608.1-201ENST00000610519 487 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 U73479.1-201ENST00000618062 168 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 AC109315.1-201ENST00000584143 1347 ntBASIC2.92□□□□□ -1.94
CCDC42Q96M95 RNU6-629P-201ENST00000384061 103 ntBASIC2.91□□□□□ -1.94
CCDC42Q96M95 RNU6-1181P-201ENST00000384191 106 ntBASIC2.91□□□□□ -1.94
CCDC42Q96M95 MIR34B-201ENST00000385076 84 ntBASIC2.91□□□□□ -1.94
CCDC42Q96M95 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC42Q96M95 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC42Q96M95 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC42Q96M95 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC42Q96M95 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC42Q96M95 FTH1P2-201ENST00000466086 412 ntBASIC2.91□□□□□ -1.94
CCDC42Q96M95 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC42Q96M95 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC42Q96M95 AC026412.2-201ENST00000512270 1075 ntBASIC2.91□□□□□ -1.94
CCDC42Q96M95 AC016065.2-201ENST00000514530 444 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms