Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC138Q96M89 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC079741.1-201ENST00000321498 212 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 RNU6-1155P-201ENST00000363554 107 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 SNORD113.2-201ENST00000364166 89 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC138Q96M89 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC138Q96M89 Y_RNA.548-201ENST00000384656 105 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC138Q96M89 RPL37P18-201ENST00000411602 243 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 TOMM22P1-201ENST00000418578 312 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 NANOGP6-201ENST00000429190 847 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC068287.1-201ENST00000430283 295 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 SKP1P1-201ENST00000438081 489 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 NPM1P49-201ENST00000448027 714 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 AL451050.1-201ENST00000450126 415 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC138Q96M89 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 AL513533.1-201ENST00000453728 415 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 MTND1P9-201ENST00000453775 944 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AP1S2P1-201ENST00000457344 379 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 MTCO1P42-201ENST00000457379 726 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC010285.1-201ENST00000470580 392 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 HMGB1P22-201ENST00000505315 124 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC005921.1-201ENST00000510589 286 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 PPBPP1-201ENST00000510807 373 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AF131216.2-201ENST00000512316 564 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 RNU6-528P-201ENST00000516926 100 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC103783.1-201ENST00000520506 373 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC060788.1-201ENST00000521318 469 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC021755.1-201ENST00000559747 1447 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 LINC00622-201ENST00000562811 1570 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC087481.2-201ENST00000565492 330 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC015726.1-201ENST00000602353 681 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC012065.4-201ENST00000602445 679 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 BPIFA4P-203ENST00000603168 689 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC006254.3-201ENST00000603353 884 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC068276.1-201ENST00000605793 379 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC090948.1-201ENST00000607464 549 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 AC079597.1-201ENST00000624306 508 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 MFSD8-242ENST00000641690 4199 ntBASIC4.42□□□□□ -1.7
CCDC138Q96M89 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC138Q96M89 AL645937.1-201ENST00000641739 1652 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC138Q96M89 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC138Q96M89 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC138Q96M89 CPHL1P-201ENST00000461341 3407 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC138Q96M89 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC138Q96M89 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 SNORA70F-201ENST00000384142 135 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 RNU6-398P-201ENST00000384143 109 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 MIR659-201ENST00000384963 97 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 AL590139.1-201ENST00000416267 400 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 RPS12P10-201ENST00000427031 377 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 GSTA7P-201ENST00000438425 448 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 AC012671.1-201ENST00000451912 203 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 RPS24P6-201ENST00000452670 400 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 AC098824.1-201ENST00000453565 980 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 SNRPGP9-201ENST00000456025 225 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 snoU13.24-201ENST00000458998 104 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 AC068724.1-201ENST00000487100 792 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 AL139099.1-201ENST00000497398 403 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 AC091965.2-201ENST00000512324 613 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 Y_RNA.695-201ENST00000516715 107 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 CDH12P4-201ENST00000517835 295 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 CDH12P3-201ENST00000517935 295 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 CDH12P1-201ENST00000518435 295 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 AC109635.4-202ENST00000531666 412 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 CR383656.6-201ENST00000550518 394 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms