Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
USP47Q96K76 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP47Q96K76 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.76□□□□□ -1.81
USP47Q96K76 AC083799.1-201ENST00000366451 910 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP47Q96K76 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
USP47Q96K76 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.76□□□□□ -1.81
USP47Q96K76 ARL5AP4-201ENST00000430731 512 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 AC009969.1-201ENST00000438726 172 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 TPTE2P6-202ENST00000445572 1007 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 RSL24D1P2-201ENST00000445584 366 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.76□□□□□ -1.81
USP47Q96K76 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.76□□□□□ -1.81
USP47Q96K76 OR5H4P-201ENST00000510851 923 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 SNORA31.21-201ENST00000517180 77 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 NOP56P3-201ENST00000549457 385 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.76□□□□□ -1.81
USP47Q96K76 AC069304.3-201ENST00000603938 1084 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 AC007336.1-201ENST00000576365 3828 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP47Q96K76 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.75□□□□□ -1.81
USP47Q96K76 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
USP47Q96K76 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP47Q96K76 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP47Q96K76 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP47Q96K76 RNU6-40P-201ENST00000384254 107 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 AL512633.1-201ENST00000399931 655 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 RNA5SP129-201ENST00000410276 118 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 BMS1P22-201ENST00000414726 313 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.75□□□□□ -1.81
USP47Q96K76 MTCO3P4-201ENST00000419236 787 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 FO393419.3-201ENST00000428741 282 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.75□□□□□ -1.81
USP47Q96K76 AP000936.2-201ENST00000447151 681 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 RN7SL297P-201ENST00000483161 293 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.75□□□□□ -1.81
USP47Q96K76 RNA5SP76-201ENST00000516277 87 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 RNA5SP282-201ENST00000516355 108 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.75□□□□□ -1.81
USP47Q96K76 POLR2KP1-201ENST00000553226 168 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 AL389895.1-201ENST00000554127 252 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 PCNAP1-202ENST00000595299 752 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 CR589904.2-201ENST00000612533 440 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.75□□□□□ -1.81
USP47Q96K76 AC243829.7-201ENST00000633081 225 ntBASIC3.75□□□□□ -1.81
USP47Q96K76 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP47Q96K76 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP47Q96K76 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP47Q96K76 AC009501.3-201ENST00000605001 1352 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 MTND4P31-201ENST00000425607 1343 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
USP47Q96K76 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
USP47Q96K76 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP47Q96K76 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP47Q96K76 XGY1-201ENST00000381172 446 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 AL139039.1-201ENST00000401900 692 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.74□□□□□ -1.81
USP47Q96K76 AL031736.2-201ENST00000426573 787 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 MYL8P-204ENST00000431574 518 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 AL513124.1-201ENST00000450410 614 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP47Q96K76 USP9YP5-201ENST00000511770 630 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.74□□□□□ -1.81
USP47Q96K76 HAUS1P3-201ENST00000523909 662 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 EIF5A2P1-201ENST00000564027 460 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 AC106734.1-201ENST00000568646 663 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 BX322635.1-201ENST00000605804 496 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 AC104820.1-201ENST00000624183 307 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.74□□□□□ -1.81
USP47Q96K76 FRG1DP-201ENST00000635586 771 ntBASIC3.74□□□□□ -1.81
USP47Q96K76 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
USP47Q96K76 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP47Q96K76 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP47Q96K76 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.73□□□□□ -1.81
USP47Q96K76 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
USP47Q96K76 RNU4-74P-201ENST00000411280 161 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 MRPL50P2-201ENST00000416821 482 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.73□□□□□ -1.81
USP47Q96K76 AC234782.4-201ENST00000417646 1048 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 AL590623.1-201ENST00000427864 105 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.73□□□□□ -1.81
USP47Q96K76 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.73□□□□□ -1.81
USP47Q96K76 AP000893.1-201ENST00000474462 794 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 AC103975.1-201ENST00000482506 483 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 AC093663.2-201ENST00000484625 313 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 AC068305.1-201ENST00000497406 726 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 AC111193.1-201ENST00000504097 155 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 AC100870.1-201ENST00000522035 505 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 AP003102.1-201ENST00000525638 661 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP47Q96K76 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.73□□□□□ -1.81
USP47Q96K76 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.73□□□□□ -1.81
USP47Q96K76 TUG1_1.1-201ENST00000610654 145 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 U6.48-201ENST00000618523 106 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.73□□□□□ -1.81
USP47Q96K76 AC046144.1-201ENST00000478559 1853 ntBASIC3.73□□□□□ -1.81
USP47Q96K76 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms