Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AC139783.2-201ENST00000504847 1145 ntBASIC5.25□□□□□ -1.57
SHDQ96IW2 AC006427.1-201ENST00000514359 712 ntBASIC5.25□□□□□ -1.57
SHDQ96IW2 AC105417.1-201ENST00000514691 285 ntBASIC5.25□□□□□ -1.57
SHDQ96IW2 AC022360.1-201ENST00000521058 340 ntBASIC5.25□□□□□ -1.57
SHDQ96IW2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.25□□□□□ -1.57
SHDQ96IW2 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.25□□□□□ -1.57
SHDQ96IW2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.25□□□□□ -1.57
SHDQ96IW2 AC060780.2-201ENST00000589047 198 ntBASIC5.25□□□□□ -1.57
SHDQ96IW2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.25□□□□□ -1.57
SHDQ96IW2 AC010680.3-201ENST00000604215 520 ntBASIC5.25□□□□□ -1.57
SHDQ96IW2 AP003117.2-201ENST00000606010 545 ntBASIC5.25□□□□□ -1.57
SHDQ96IW2 AC103710.2-201ENST00000609912 942 ntBASIC5.25□□□□□ -1.57
SHDQ96IW2 TUG1_1.1-201ENST00000610654 145 ntBASIC5.25□□□□□ -1.57
SHDQ96IW2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.25□□□□□ -1.57
SHDQ96IW2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.25□□□□□ -1.57
SHDQ96IW2 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHDQ96IW2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SHDQ96IW2 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHDQ96IW2 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.25□□□□□ -1.57
SHDQ96IW2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.25□□□□□ -1.57
SHDQ96IW2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHDQ96IW2 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHDQ96IW2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.24□□□□□ -1.57
SHDQ96IW2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHDQ96IW2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHDQ96IW2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.24□□□□□ -1.57
SHDQ96IW2 RNU6-989P-201ENST00000362756 107 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 RN7SKP153-201ENST00000365026 316 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHDQ96IW2 RNU6-637P-201ENST00000384050 107 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 AL354719.1-201ENST00000406535 843 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 RNA5SP113-201ENST00000410486 84 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 RNU6-1068P-201ENST00000410958 103 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 RPL23AP38-201ENST00000423801 469 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.24□□□□□ -1.57
SHDQ96IW2 AC092162.1-201ENST00000432828 434 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.24□□□□□ -1.57
SHDQ96IW2 RHOT1P3-201ENST00000436571 331 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.24□□□□□ -1.57
SHDQ96IW2 RPL34P20-201ENST00000442771 351 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.24□□□□□ -1.57
SHDQ96IW2 AL590399.6-201ENST00000446396 307 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.24□□□□□ -1.57
SHDQ96IW2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.24□□□□□ -1.57
SHDQ96IW2 AC006512.1-201ENST00000468816 291 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 AL163973.1-201ENST00000484753 577 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.24□□□□□ -1.57
SHDQ96IW2 SNORD27.1-201ENST00000516319 72 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.24□□□□□ -1.57
SHDQ96IW2 OR4R3P-201ENST00000525084 838 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.24□□□□□ -1.57
SHDQ96IW2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.24□□□□□ -1.57
SHDQ96IW2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.24□□□□□ -1.57
SHDQ96IW2 LSM3P2-201ENST00000551246 273 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.24□□□□□ -1.57
SHDQ96IW2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.24□□□□□ -1.57
SHDQ96IW2 AC018638.8-201ENST00000588755 281 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.24□□□□□ -1.57
SHDQ96IW2 AC006272.2-201ENST00000594725 163 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 AL117336.2-201ENST00000602435 335 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 AC006254.3-201ENST00000603353 884 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 AC087045.1-201ENST00000605856 382 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.24□□□□□ -1.57
SHDQ96IW2 AL136221.1-201ENST00000621449 509 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.24□□□□□ -1.57
SHDQ96IW2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
SHDQ96IW2 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHDQ96IW2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHDQ96IW2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.24□□□□□ -1.57
SHDQ96IW2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.24□□□□□ -1.57
SHDQ96IW2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.24□□□□□ -1.57
SHDQ96IW2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.24□□□□□ -1.57
SHDQ96IW2 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHDQ96IW2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHDQ96IW2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHDQ96IW2 AC006020.1-201ENST00000420179 1854 ntBASIC5.24□□□□□ -1.57
SHDQ96IW2 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SHDQ96IW2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.24□□□□□ -1.57
SHDQ96IW2 AL022322.2-201ENST00000624072 20397 ntBASIC5.23□□□□□ -1.57
SHDQ96IW2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.23□□□□□ -1.57
SHDQ96IW2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHDQ96IW2 AC002525.1-201ENST00000624392 1622 ntBASIC5.23□□□□□ -1.57
SHDQ96IW2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHDQ96IW2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.23□□□□□ -1.57
SHDQ96IW2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHDQ96IW2 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SHDQ96IW2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHDQ96IW2 Y_RNA.367-201ENST00000365544 101 ntBASIC5.23□□□□□ -1.57
SHDQ96IW2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHDQ96IW2 RNU6-767P-201ENST00000384132 107 ntBASIC5.23□□□□□ -1.57
SHDQ96IW2 RNU6-39P-201ENST00000384344 107 ntBASIC5.23□□□□□ -1.57
SHDQ96IW2 MIR454-201ENST00000390180 115 ntBASIC5.23□□□□□ -1.57
SHDQ96IW2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHDQ96IW2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHDQ96IW2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHDQ96IW2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.23□□□□□ -1.57
SHDQ96IW2 RPL18P10-201ENST00000425606 538 ntBASIC5.23□□□□□ -1.57
SHDQ96IW2 RPL23AP33-201ENST00000442301 452 ntBASIC5.23□□□□□ -1.57
SHDQ96IW2 AL354714.3-201ENST00000447284 493 ntBASIC5.23□□□□□ -1.57
SHDQ96IW2 OR1H1P-201ENST00000448731 937 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms