Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RFT1Q96AA3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RFT1Q96AA3 ZNF542P-204ENST00000482727 1305 ntBASIC3.44□□□□□ -1.86
RFT1Q96AA3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RFT1Q96AA3 AP000776.1-201ENST00000530032 1663 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RFT1Q96AA3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RFT1Q96AA3 ZNF826P-207ENST00000622273 1910 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RFT1Q96AA3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RFT1Q96AA3 MIR585-201ENST00000384887 94 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 RNU2-15P-201ENST00000410692 191 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 RAD23BP2-201ENST00000416003 1207 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 HMGB1P49-201ENST00000418882 569 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 AL139421.1-201ENST00000423010 169 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 DNAJC19P7-201ENST00000428811 344 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 HMGB1P37-201ENST00000439613 609 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC098824.1-201ENST00000453565 980 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 BTF3P5-201ENST00000457252 467 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 snoU13.24-201ENST00000458998 104 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC087312.1-201ENST00000471411 480 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 UQCRHP4-201ENST00000471686 272 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC093853.1-201ENST00000515689 483 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RFT1Q96AA3 MED28P5-201ENST00000528254 438 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC109635.4-202ENST00000531666 412 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC023050.2-201ENST00000544968 387 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 AL121603.1-201ENST00000553815 142 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 XIAPP1-201ENST00000603162 600 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 ELOCP35-201ENST00000604289 336 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC055876.5-201ENST00000605667 259 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC080013.3-201ENST00000606839 578 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 AL451064.1-201ENST00000607718 471 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 AL590282.1-201ENST00000610379 1136 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 MIR7151-201ENST00000617477 60 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 AC004009.2-201ENST00000623016 728 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 AP000676.4-201ENST00000624659 623 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 SNORA50A-202ENST00000629536 136 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RFT1Q96AA3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RFT1Q96AA3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
RFT1Q96AA3 MTND5P24-201ENST00000438892 1767 ntBASIC3.43□□□□□ -1.86
RFT1Q96AA3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RFT1Q96AA3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC097714.1-201ENST00000511272 1647 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 SNORA60-201ENST00000362396 134 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 RNA5SP235-201ENST00000365411 114 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RFT1Q96AA3 TAF9BP1-201ENST00000396646 746 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 RPL23AP29-201ENST00000397284 453 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 DHFRP6-201ENST00000401776 268 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 RPS7P15-201ENST00000415804 584 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC099677.1-201ENST00000420575 175 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RFT1Q96AA3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 RPS29P31-201ENST00000446147 164 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 Z73417.1-201ENST00000447373 778 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 ARPC3P5-201ENST00000448802 534 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 RPS29P22-201ENST00000472363 168 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 NDUFA5P9-201ENST00000472609 340 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC105137.1-201ENST00000484355 562 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 RPL23AP55-201ENST00000498163 452 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 PRELID3BP5-201ENST00000508612 460 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 XKRY-201ENST00000510392 1100 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC010587.2-201ENST00000511727 448 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 FABP5P12-201ENST00000515543 389 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC010198.2-201ENST00000550612 259 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 AL512347.1-201ENST00000566420 503 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms