Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-CQ95604 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-CQ95604 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-CQ95604 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-CQ95604 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-CQ95604 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
HLA-CQ95604 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.34□□□□□ -1.39
HLA-CQ95604 AC092747.4-201ENST00000620519 1861 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
HLA-CQ95604 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-CQ95604 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-CQ95604 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
HLA-CQ95604 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
HLA-CQ95604 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
HLA-CQ95604 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HLA-CQ95604 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.34□□□□□ -1.4
HLA-CQ95604 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.4
HLA-CQ95604 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.34□□□□□ -1.4
HLA-CQ95604 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-CQ95604 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HLA-CQ95604 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-CQ95604 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-CQ95604 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-CQ95604 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-CQ95604 Y_RNA.352-201ENST00000365439 102 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
HLA-CQ95604 SNORA56-201ENST00000383966 129 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 RNU6-701P-201ENST00000384059 107 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 MIR541-201ENST00000401360 84 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 SNRPEP6-201ENST00000407465 277 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 AL023284.3-201ENST00000407767 334 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 RPS23P10-201ENST00000416185 486 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-CQ95604 AC096920.1-201ENST00000423991 241 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 CEACAMP1-201ENST00000434624 1035 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-CQ95604 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-CQ95604 AC016027.4-201ENST00000450866 277 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 RN7SL547P-201ENST00000490793 290 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 AC083795.1-201ENST00000491760 320 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 RN7SL808P-201ENST00000496066 299 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 ACA59.1-201ENST00000515966 143 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-CQ95604 SULT1C2P2-201ENST00000562517 294 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 AC009120.3-201ENST00000563335 499 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-CQ95604 AC097467.4-201ENST00000605504 141 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 AC064801.1-201ENST00000612025 407 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 MIR6130-201ENST00000619419 109 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
HLA-CQ95604 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-CQ95604 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-CQ95604 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-CQ95604 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-CQ95604 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HLA-CQ95604 AP000866.6-201ENST00000638898 3579 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-CQ95604 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-CQ95604 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-CQ95604 AL662795.2-201ENST00000624252 3706 ntBASIC6.33□□□□□ -1.4
HLA-CQ95604 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-CQ95604 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-CQ95604 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-CQ95604 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-CQ95604 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-CQ95604 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-CQ95604 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-CQ95604 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
HLA-CQ95604 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
HLA-CQ95604 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HLA-CQ95604 SNORD27-201ENST00000363981 72 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 Y_RNA.297-201ENST00000364950 91 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 Y_RNA.539-201ENST00000384635 107 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 RNU11-4P-201ENST00000391149 133 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 MORN2-203ENST00000409131 544 ntTSL 5 BASIC6.32□□□□□ -1.4
HLA-CQ95604 RPS21P8-201ENST00000413365 247 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 MYL8P-204ENST00000431574 518 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 AL353997.1-201ENST00000432936 108 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 DEFA11P-201ENST00000446470 261 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 CEACAMP6-201ENST00000452007 574 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 RN7SL72P-201ENST00000460697 269 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 AC105384.2-201ENST00000508433 640 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-CQ95604 NDUFB4P9-201ENST00000511646 388 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-CQ95604 AC016065.2-201ENST00000514530 444 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 Y_RNA.689-201ENST00000516589 107 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-CQ95604 AC015720.2-201ENST00000567709 334 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-CQ95604 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-CQ95604 RN7SL708P-201ENST00000580952 299 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 AC012119.1-201ENST00000603184 222 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 AL049539.1-201ENST00000611964 459 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 AL731566.2-201ENST00000618971 317 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 AC127459.3-201ENST00000624328 466 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
HLA-CQ95604 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-CQ95604 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-CQ95604 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms