Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MIR550A3-201ENST00000390735 95 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 RN7SKP267-201ENST00000410381 285 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AC127391.1-201ENST00000411737 98 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.45□□□□□ -1.54
BRF1Q92994 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF1Q92994 MTCO2P5-201ENST00000422621 426 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF1Q92994 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF1Q92994 HMGB3P12-201ENST00000438745 556 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AC092013.1-201ENST00000438795 332 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF1Q92994 AC022364.2-201ENST00000457963 554 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AC092324.1-201ENST00000468671 324 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AP001025.2-201ENST00000490908 477 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF1Q92994 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF1Q92994 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF1Q92994 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF1Q92994 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF1Q92994 AC051619.2-201ENST00000559063 397 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.45□□□□□ -1.54
BRF1Q92994 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF1Q92994 AC087283.1-201ENST00000604029 1074 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AC010680.3-201ENST00000604215 520 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 BNIP3P10-201ENST00000605360 577 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 SNORD91B-202ENST00000608459 222 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AC019193.2-201ENST00000610012 634 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AL133173.2-201ENST00000614270 90 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
BRF1Q92994 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.45□□□□□ -1.54
BRF1Q92994 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF1Q92994 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.45□□□□□ -1.54
BRF1Q92994 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
BRF1Q92994 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF1Q92994 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF1Q92994 KPNA2P2-201ENST00000419546 1489 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 ZNF680P1-201ENST00000436625 1469 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
BRF1Q92994 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.45□□□□□ -1.54
BRF1Q92994 AL391684.1-202ENST00000641293 1636 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.44□□□□□ -1.54
BRF1Q92994 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF1Q92994 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF1Q92994 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF1Q92994 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF1Q92994 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.44□□□□□ -1.54
BRF1Q92994 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.44□□□□□ -1.54
BRF1Q92994 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF1Q92994 RNY3P3-201ENST00000363816 102 ntBASIC5.44□□□□□ -1.54
BRF1Q92994 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
BRF1Q92994 RNA5SP87-201ENST00000384155 118 ntBASIC5.44□□□□□ -1.54
BRF1Q92994 AC016769.3-201ENST00000396562 315 ntBASIC5.44□□□□□ -1.54
BRF1Q92994 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.44□□□□□ -1.54
BRF1Q92994 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.44□□□□□ -1.54
BRF1Q92994 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.44□□□□□ -1.54
BRF1Q92994 RNU6-420P-201ENST00000458780 107 ntBASIC5.44□□□□□ -1.54
BRF1Q92994 RPL7P15-201ENST00000461190 712 ntBASIC5.44□□□□□ -1.54
BRF1Q92994 AC083982.1-201ENST00000485679 344 ntBASIC5.44□□□□□ -1.54
BRF1Q92994 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.44□□□□□ -1.54
BRF1Q92994 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.44□□□□□ -1.54
BRF1Q92994 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.44□□□□□ -1.54
BRF1Q92994 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.44□□□□□ -1.54
BRF1Q92994 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.44□□□□□ -1.54
BRF1Q92994 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.44□□□□□ -1.54
BRF1Q92994 AC099489.2-201ENST00000574976 260 ntBASIC5.44□□□□□ -1.54
BRF1Q92994 AC123768.4-201ENST00000616244 701 ntBASIC5.44□□□□□ -1.54
BRF1Q92994 AC091953.3-201ENST00000623220 236 ntBASIC5.44□□□□□ -1.54
BRF1Q92994 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRF1Q92994 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF1Q92994 AC108751.5-201ENST00000492880 1336 ntBASIC5.44□□□□□ -1.54
BRF1Q92994 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BRF1Q92994 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BRF1Q92994 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.44□□□□□ -1.54
BRF1Q92994 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.43□□□□□ -1.54
BRF1Q92994 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
BRF1Q92994 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF1Q92994 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF1Q92994 AL445437.1-201ENST00000623157 3087 ntBASIC5.43□□□□□ -1.54
BRF1Q92994 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.43□□□□□ -1.54
BRF1Q92994 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF1Q92994 FRG1BP-201ENST00000278882 761 ntBASIC5.43□□□□□ -1.54
BRF1Q92994 OR5J1P-201ENST00000313544 939 ntBASIC5.43□□□□□ -1.54
BRF1Q92994 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
BRF1Q92994 BTBD10P2-201ENST00000404779 676 ntBASIC5.43□□□□□ -1.54
BRF1Q92994 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.43□□□□□ -1.54
BRF1Q92994 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF1Q92994 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.43□□□□□ -1.54
BRF1Q92994 AL360081.1-201ENST00000428299 555 ntBASIC5.43□□□□□ -1.54
BRF1Q92994 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF1Q92994 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.43□□□□□ -1.54
BRF1Q92994 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.43□□□□□ -1.54
BRF1Q92994 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.43□□□□□ -1.54
BRF1Q92994 RPL39P36-201ENST00000490784 156 ntBASIC5.43□□□□□ -1.54
BRF1Q92994 AC011005.3-201ENST00000491624 395 ntBASIC5.43□□□□□ -1.54
BRF1Q92994 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.43□□□□□ -1.54
BRF1Q92994 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.43□□□□□ -1.54
BRF1Q92994 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.43□□□□□ -1.54
BRF1Q92994 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.43□□□□□ -1.54
BRF1Q92994 SUB1P2-201ENST00000556401 297 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms