Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC109780.2-201ENST00000413467 845 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AL445669.1-201ENST00000426743 755 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 EZH2P1-201ENST00000431167 291 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 CKS1BP5-201ENST00000434172 273 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 MTCO2P7-201ENST00000446518 666 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 SNRPGP9-201ENST00000456025 225 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 RPS4XP18-201ENST00000495480 763 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC010424.1-201ENST00000506336 297 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 FTH1P21-201ENST00000512179 511 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC034159.1-201ENST00000513885 583 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC024224.1-201ENST00000538284 609 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 HMGB3P26-201ENST00000560051 582 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 RN7SL703P-201ENST00000578485 302 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AL353997.4-201ENST00000586196 166 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 RSL24D1P11-201ENST00000591045 491 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC119751.7-201ENST00000600494 245 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC012065.4-201ENST00000602445 679 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AL355812.1-201ENST00000603215 216 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 BCRP9-201ENST00000605312 388 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC025594.3-201ENST00000613068 790 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC092140.2-201ENST00000618027 521 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 FAM91A3P-201ENST00000456826 2544 ntBASIC4.26□□□□□ -1.73
HMGB4Q8WW32 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HMGB4Q8WW32 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 OR11H5P-202ENST00000641612 1325 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 RNU6-989P-201ENST00000362756 107 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 RNU1-20P-201ENST00000363314 162 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 Y_RNA.493-201ENST00000384422 102 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 U8.14-201ENST00000390843 143 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 MIR921-201ENST00000401133 56 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AL355379.1-201ENST00000405542 640 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 RNU2-15P-201ENST00000410692 191 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 SNORA74C-2-201ENST00000411179 201 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 RN7SKP142-201ENST00000411236 328 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC127526.1-201ENST00000417526 366 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 UBTFL3-201ENST00000418934 1024 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 OR8F1P-201ENST00000425243 930 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 MTCYBP45-201ENST00000435243 565 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 RPL37P21-201ENST00000435890 276 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 SDCBPP1-201ENST00000440192 890 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 RPS26P2-201ENST00000440331 348 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 PPIAP3-201ENST00000450588 505 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AL445669.2-201ENST00000454425 421 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 RPS29P19-201ENST00000479709 171 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC004069.2-201ENST00000505438 1114 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 MTND4P2-201ENST00000507767 1203 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC093677.1-201ENST00000514414 678 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 RN7SKP116-201ENST00000516902 319 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AL606490.9-201ENST00000603331 271 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC128687.1-201ENST00000605304 619 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC239868.4-201ENST00000608318 671 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 SNORD91B-202ENST00000608459 222 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AL596245.1-201ENST00000618994 362 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC025048.6-202ENST00000627667 438 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC090582.1-201ENST00000636321 199 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 AC008013.2-202ENST00000637965 364 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 MTND4P4-201ENST00000439033 1366 ntBASIC4.25□□□□□ -1.73
HMGB4Q8WW32 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGB4Q8WW32 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms