Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AC006971.1-201ENST00000407916 4486 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 CCT4P2-201ENST00000233836 1548 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 RNU1-20P-201ENST00000363314 162 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 Y_RNA.311-201ENST00000365068 96 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC007066.1-201ENST00000392902 381 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AL359643.1-201ENST00000404109 423 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 GSTM3P2-201ENST00000412746 530 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AL356095.1-201ENST00000417217 199 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 RPS26P47-201ENST00000427219 348 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 RPS25P9-201ENST00000435591 252 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 RPL7P31-201ENST00000450192 724 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 RPL23AP81-201ENST00000455252 467 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AL591473.1-201ENST00000464297 313 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC093311.1-201ENST00000506586 2021 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AL592156.1-201ENST00000508758 304 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 MTCYBP43-201ENST00000513621 740 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC099522.1-202ENST00000514718 367 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 RNA5SP73-201ENST00000516744 108 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 MIR2116-201ENST00000517221 80 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 HMGB1P33-201ENST00000563485 527 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC109315.1-201ENST00000584143 1347 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 PSMA6P4-201ENST00000603247 718 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC013553.2-201ENST00000604244 589 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AL161729.4-201ENST00000604650 476 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AC136475.10-201ENST00000620253 385 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AL160413.1-201ENST00000622780 310 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 AL133243.3-201ENST00000617415 3004 ntBASIC5.1□□□□□ -1.59
SH3RF3Q8TEJ3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC083843.3-201ENST00000623679 2186 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC117529.2-201ENST00000512159 2068 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AL118496.1-201ENST00000440201 1812 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 Y_RNA.142-201ENST00000363491 102 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 EIF4A1P3-201ENST00000411521 244 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 YWHAEP5-201ENST00000431545 765 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AL132765.1-201ENST00000434165 553 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 CEACAMP1-201ENST00000434624 1035 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 PPIAP13-201ENST00000434706 478 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC093027.1-201ENST00000546698 429 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms