Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 SNORA70.6-201ENST00000383934 134 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 RNU1-74P-201ENST00000384108 171 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 MIR589-201ENST00000385238 99 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AL034403.1-201ENST00000399414 885 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 RNU2-38P-201ENST00000410856 79 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 VDAC1P9-201ENST00000412766 841 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 BX323014.1-201ENST00000412876 237 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 MTND5P7-201ENST00000413558 1798 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 EIF4EP1-201ENST00000422311 642 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 RPL7AP49-201ENST00000429522 581 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AL591438.1-201ENST00000433508 581 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 RPS17P8-201ENST00000434525 335 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 SETP5-201ENST00000437270 562 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AL138799.3-201ENST00000438968 350 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 TXNP5-201ENST00000441043 315 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 CEACAMP7-201ENST00000444105 496 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 SLC25A18P1-201ENST00000449385 454 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AL049874.2-201ENST00000492636 288 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 RN7SKP66-201ENST00000516681 231 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AC092490.3-201ENST00000545370 572 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 HMGB3P26-201ENST00000560051 582 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 MIR548AI-201ENST00000579940 88 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AC098848.2-201ENST00000588023 330 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AC125232.2-201ENST00000592457 143 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 BNIP3P25-201ENST00000596023 559 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AC078899.3-201ENST00000599065 212 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AP001521.1-201ENST00000609150 300 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 CASC19-260ENST00000641828 2001 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 ABCC13-202ENST00000463099 3842 ntBASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEDD1Q8NHV4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AC023421.1-201ENST00000590535 1785 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AC140134.1-201ENST00000511830 3544 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 SNURFL-201ENST00000309296 343 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 RNA5SP240-201ENST00000365355 128 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 RHOT1P2-201ENST00000366423 333 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 Y_RNA.477-201ENST00000384352 108 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 RNU6-823P-201ENST00000391042 103 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AP000275.1-201ENST00000411943 390 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AL354868.1-201ENST00000417077 482 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 DNAJC19P7-201ENST00000428811 344 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 RPL21P2-201ENST00000440049 481 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 PRPF38AP1-201ENST00000451976 933 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AC013470.1-201ENST00000453438 462 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 MED28P2-201ENST00000475771 317 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 RPL7P43-201ENST00000478876 753 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 RN7SL814P-201ENST00000487715 300 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 RPS27P27-201ENST00000498779 255 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 HSPD1P15-201ENST00000505573 1122 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AC116655.1-201ENST00000508324 901 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms