Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 ZNF90P1-201ENST00000480493 1951 ntBASIC3.01□□□□□ -1.93
CLHC1Q8NHS4 SGO1P2-201ENST00000429458 1589 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 AP003122.5-201ENST00000527668 3766 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC008264.2-201ENST00000610193 3731 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 RNU6-1249P-201ENST00000363237 111 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 RNU6-339P-201ENST00000384310 107 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 RNU6-1226P-201ENST00000384317 107 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLHC1Q8NHS4 RN7SKP123-201ENST00000410732 291 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 BMS1P22-201ENST00000414726 313 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 RPS3AP9-201ENST00000417027 792 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC069157.1-201ENST00000421749 137 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC109583.1-201ENST00000432156 268 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC108734.1-201ENST00000439549 399 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC068135.1-201ENST00000446164 246 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 RNA5SP310-201ENST00000459084 116 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 RNU6-488P-201ENST00000515918 99 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 SNORA67.7-201ENST00000516664 135 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 PRELID3BP8-201ENST00000604148 295 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 AL355810.1-201ENST00000614629 552 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 MIR6076-201ENST00000617521 113 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLHC1Q8NHS4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CLHC1Q8NHS4 AC091564.4-201ENST00000533934 2194 ntBASIC3□□□□□ -1.93
CLHC1Q8NHS4 MTCO1P12-201ENST00000414273 1543 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 U8.9-201ENST00000365667 134 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 SNORA46-201ENST00000384762 135 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC110754.1-201ENST00000399740 601 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AL357075.1-201ENST00000404107 726 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC011242.1-201ENST00000433596 1158 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC244505.4-201ENST00000434905 287 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC005019.1-201ENST00000436455 431 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 RPL21P2-201ENST00000440049 481 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 UBE2V1P5-201ENST00000440070 405 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 RPS12P18-201ENST00000442381 270 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 SSXP5-201ENST00000443473 287 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 PDSS1P2-201ENST00000449397 678 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 UQCRHP3-201ENST00000451503 251 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC015908.1-201ENST00000478739 476 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC006499.5-201ENST00000505037 514 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC008565.1-201ENST00000509046 885 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC007536.1-201ENST00000533382 349 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 NCAPGP2-201ENST00000557911 754 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC005412.1-201ENST00000580812 1049 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 CCDC58P3-201ENST00000590792 430 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC091057.2-201ENST00000602594 792 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC015849.2-201ENST00000605738 409 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC009570.1-201ENST00000609599 745 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 AC025016.1-201ENST00000616746 682 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 CUL1P1-201ENST00000509510 2425 ntBASIC2.99□□□□□ -1.93
CLHC1Q8NHS4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 SNORA51.4-201ENST00000364993 124 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 RNU6-761P-201ENST00000384148 107 ntBASIC2.98□□□□□ -1.93
CLHC1Q8NHS4 RPL21P3-201ENST00000395517 478 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms