Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RN7SKP174-201ENST00000363803 330 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RNU6-461P-201ENST00000364195 107 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 TRAV29DV5-201ENST00000390458 469 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 EIF4E2P1-201ENST00000393781 255 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 TXN2-202ENST00000403313 912 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AL133475.1-201ENST00000404414 305 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 MIR1277-201ENST00000408536 78 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RNA5SP118-201ENST00000410385 109 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 PPIL1P1-201ENST00000423936 499 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AL139158.1-201ENST00000424719 340 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC147651.2-201ENST00000434541 420 ntTSL 3 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC004006.1-201ENST00000434994 377 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AL445928.1-201ENST00000435545 222 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC007881.1-201ENST00000437460 187 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 HYI-AS1-201ENST00000444386 545 ntTSL 2 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 ATP5G1P7-201ENST00000444398 400 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AL008718.1-201ENST00000445867 487 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AL031274.1-201ENST00000450334 232 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AL133353.1-201ENST00000452391 303 ntTSL 5 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RN7SL674P-201ENST00000463397 275 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC112771.1-201ENST00000463581 102 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RN7SL430P-201ENST00000464176 242 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 MED27-204ENST00000474263 762 ntTSL 2 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RN7SL282P-201ENST00000479676 297 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC092989.1-201ENST00000481235 277 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC105137.1-201ENST00000484355 562 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RN7SL388P-201ENST00000498736 339 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 SNORA19.2-201ENST00000516013 114 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC104051.1-201ENST00000520426 570 ntTSL 4 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 TUBB4BP4-201ENST00000527023 304 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC010768.1-201ENST00000533814 543 ntTSL 3 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 B2M-202ENST00000544417 933 ntTSL 5 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 FAM181A-AS1-203ENST00000555732 258 ntTSL 3 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 TGIF2LX-202ENST00000561129 928 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 SSH2-209ENST00000579954 428 ntTSL 3 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 DHRS7B-208ENST00000581463 729 ntTSL 3 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC024575.1-201ENST00000590399 682 ntTSL 5 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AP003465.2-201ENST00000602571 373 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 RPL23AP88-201ENST00000605759 454 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC103974.2-201ENST00000611319 778 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 AC241644.3-202ENST00000622634 535 ntTSL 5 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 U4.7-201ENST00000638126 106 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SVIPQ8NHG7 EOGT-210ENST00000615922 1931 ntBASIC3.31□□□□□ -1.88
SVIPQ8NHG7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 LINC01266-201ENST00000420823 3948 ntTSL 2 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 OR56A5-201ENST00000340110 738 ntBASIC3.3□□□□□ -1.88
SVIPQ8NHG7 RNA5SP307-201ENST00000362863 116 ntBASIC3.3□□□□□ -1.88
SVIPQ8NHG7 AC092634.1-201ENST00000366505 199 ntBASIC3.3□□□□□ -1.88
SVIPQ8NHG7 SET-203ENST00000372688 801 ntTSL 2 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 AP000580.1-201ENST00000404439 358 ntBASIC3.3□□□□□ -1.88
SVIPQ8NHG7 RNA5SP390-201ENST00000410191 113 ntBASIC3.3□□□□□ -1.88
SVIPQ8NHG7 BX323014.1-201ENST00000412876 237 ntBASIC3.3□□□□□ -1.88
SVIPQ8NHG7 SNORD56-201ENST00000413522 71 ntBASIC3.3□□□□□ -1.88
SVIPQ8NHG7 RPL7AP25-201ENST00000423357 805 ntBASIC3.3□□□□□ -1.88
SVIPQ8NHG7 RANP5-201ENST00000427731 655 ntBASIC3.3□□□□□ -1.88
SVIPQ8NHG7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 PFN1P11-201ENST00000445829 389 ntBASIC3.3□□□□□ -1.88
SVIPQ8NHG7 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 AC016027.4-201ENST00000450866 277 ntBASIC3.3□□□□□ -1.88
SVIPQ8NHG7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 AL033528.2-201ENST00000455431 849 ntTSL 3 BASIC3.3□□□□□ -1.88
SVIPQ8NHG7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms