Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AL353997.5-201ENST00000618886 171 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC092593.1-201ENST00000515413 1815 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 TRGV6-201ENST00000417928 299 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 RPL36AP33-201ENST00000450395 310 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC093663.2-201ENST00000484625 313 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC026801.2-201ENST00000515352 425 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 SNORD116-26-201ENST00000516006 96 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 MTND5P21-201ENST00000531961 522 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC009570.1-201ENST00000609599 745 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC009452.1-201ENST00000640823 606 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 MTND5P19-201ENST00000424872 1794 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 GTF2H2B-203ENST00000508065 1432 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC006378.2-201ENST00000623178 2476 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 HMGB1P13-201ENST00000406019 642 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 HSPE1P22-201ENST00000456856 327 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 SCGB1D5P-201ENST00000515134 247 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 FAM60DP-201ENST00000524174 632 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 MIR4781-201ENST00000585250 76 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC099778.2-201ENST00000610904 211 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC000367.1-201ENST00000452711 1766 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 MIR365B-201ENST00000362317 111 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AL583834.1-201ENST00000406943 343 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 HMGN2P35-201ENST00000412164 270 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 OR2AS1P-201ENST00000427827 319 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 FAM103A2P-201ENST00000444122 354 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC147055.1-201ENST00000509261 750 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 RN7SKP272-201ENST00000516988 232 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC068714.1-201ENST00000559623 800 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC241585.2-209ENST00000638217 143 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 Y_RNA.595-201ENST00000410403 105 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 HNRNPDLP1-201ENST00000412834 550 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 MTCO1P42-201ENST00000457379 726 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 RPL23AP62-201ENST00000463396 453 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 HMGB1P25-201ENST00000468402 607 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 GAPDHP39-201ENST00000481866 979 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC010620.2-201ENST00000600135 313 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 NTAN1P1-201ENST00000603150 646 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC007619.2-201ENST00000605743 379 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 RNA5SP456-201ENST00000364002 114 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC010881.1-201ENST00000433830 235 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 Z99127.2-201ENST00000441426 334 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 RPL7P31-201ENST00000450192 724 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 RN7SKP210-201ENST00000459176 261 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC108210.2-201ENST00000503681 201 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC007938.3-201ENST00000604965 623 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC103988.1-201ENST00000566382 2177 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 RPL21P132-201ENST00000331267 462 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 RPL7P26-201ENST00000333817 754 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 LAMTOR5P1-201ENST00000444290 270 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 RPL23AP15-201ENST00000450202 459 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 SRI-210ENST00000490437 570 ntTSL 2 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 ANXA2P1-201ENST00000505539 926 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC010265.1-201ENST00000513509 211 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms