Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC112Q8NEF3 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC112Q8NEF3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC112Q8NEF3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC112Q8NEF3 AC125494.3-201ENST00000602759 455 ntBASIC3.14□□□□□ -1.91
CCDC112Q8NEF3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC112Q8NEF3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC112Q8NEF3 MTCO1P24-201ENST00000515438 1558 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 RNU6-335P-201ENST00000364563 113 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 RNU6-1293P-201ENST00000384077 107 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 RNU6-31P-201ENST00000384388 108 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 RAD23BP2-201ENST00000416003 1207 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 NUP35P2-201ENST00000416748 943 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 MRPL50P2-201ENST00000416821 482 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AC234782.4-201ENST00000417646 1048 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 BOLA3P4-201ENST00000418151 400 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 PSMA2P3-201ENST00000429685 675 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AL831737.1-201ENST00000441288 271 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 NANOGNBP1-201ENST00000448444 480 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AL513343.1-201ENST00000451818 792 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 C1DP3-201ENST00000455013 423 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 RPL37P3-201ENST00000456825 293 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 RN7SKP272-201ENST00000516988 232 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AL356575.1-201ENST00000603008 283 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AC124312.4-201ENST00000605533 310 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AC231759.1-201ENST00000616455 597 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 RNU6-156P-201ENST00000621869 107 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 FAM157B-203ENST00000639350 358 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 AL136164.4-201ENST00000625013 2135 ntBASIC3.13□□□□□ -1.91
CCDC112Q8NEF3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 RNU6-670P-201ENST00000364312 104 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AL354719.1-201ENST00000406535 843 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 COTL1P1-201ENST00000422309 375 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AL606490.7-201ENST00000433136 191 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AC127537.2-201ENST00000439258 465 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 RSL24D1P3-201ENST00000449255 495 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AC140076.1-201ENST00000449897 361 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 OR6K1P-201ENST00000456766 971 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AC006445.1-201ENST00000491925 405 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AL133271.1-201ENST00000538229 291 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 LARP7P3-201ENST00000579888 337 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AL451007.1-201ENST00000595491 289 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AC006539.2-201ENST00000601729 572 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AC015871.2-201ENST00000603605 948 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 AC084036.1-201ENST00000609190 508 ntBASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC112Q8NEF3 SNORA25.6-201ENST00000364121 118 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 SNORD21-201ENST00000383953 95 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AL512633.1-201ENST00000399931 655 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 RPL7P10-201ENST00000417407 739 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 ST13P20-201ENST00000447996 1065 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 RPL21P104-201ENST00000464143 478 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 S100A11P2-201ENST00000467589 312 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AC003982.1-202ENST00000469928 248 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AC119751.5-201ENST00000514077 770 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 MTND5P4-201ENST00000514978 288 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AC090136.1-201ENST00000520009 240 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AC239860.2-201ENST00000525886 270 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 HPRT1P3-201ENST00000539521 576 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AC022080.3-201ENST00000544433 482 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 SETP2-201ENST00000553886 926 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AC007566.2-201ENST00000603642 413 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AC006023.2-201ENST00000609916 167 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 CR381653.2-201ENST00000624041 768 ntBASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC112Q8NEF3 AP003122.5-201ENST00000527668 3766 ntBASIC3.1□□□□□ -1.91
CCDC112Q8NEF3 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.1□□□□□ -1.91
CCDC112Q8NEF3 MIR26A1-201ENST00000362205 77 ntBASIC3.1□□□□□ -1.91
CCDC112Q8NEF3 AL096701.2-201ENST00000416920 238 ntBASIC3.1□□□□□ -1.91
CCDC112Q8NEF3 AL513043.1-201ENST00000439124 535 ntBASIC3.1□□□□□ -1.91
CCDC112Q8NEF3 TPTE2P6-202ENST00000445572 1007 ntBASIC3.1□□□□□ -1.91
CCDC112Q8NEF3 HMGB1P5-202ENST00000451497 985 ntBASIC3.1□□□□□ -1.91
CCDC112Q8NEF3 AC068724.1-201ENST00000487100 792 ntBASIC3.1□□□□□ -1.91
CCDC112Q8NEF3 AP001025.2-201ENST00000490908 477 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms