Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RNU2-9P-201ENST00000410194 145 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 RN7SKP293-201ENST00000411389 296 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 UQCRBP1-201ENST00000421129 336 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC093655.2-201ENST00000425735 631 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 RNU6-261P-201ENST00000459506 102 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 RPS4XP10-201ENST00000465034 731 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC087385.1-201ENST00000475062 312 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 RN7SL717P-201ENST00000478343 297 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 RPS4XP20-201ENST00000505751 772 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 SCARNA24.1-201ENST00000516465 137 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 OR4P1P-201ENST00000530808 1136 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 SETP2-201ENST00000553886 926 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC004853.1-201ENST00000604902 698 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 Z84480.1-201ENST00000605131 311 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 BX323046.1-201ENST00000610145 535 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 uc_338.18-201ENST00000615451 175 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC010133.1-201ENST00000615809 842 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 SNORA11.6-201ENST00000619030 128 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC093648.1-201ENST00000623546 606 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AP003400.5-201ENST00000624827 617 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AL159972.1-201ENST00000625150 448 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 CYP4F35P-202ENST00000636121 390 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC108467.2-201ENST00000617640 1597 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AC091046.3-201ENST00000631455 1574 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AC000123.3-201ENST00000624029 4975 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 RNY1P12-201ENST00000364251 105 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 MIR1-2-201ENST00000384961 85 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 U3.29-201ENST00000391296 212 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 RNU2-15P-201ENST00000410692 191 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 Z95327.2-201ENST00000414579 1873 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 RGS17P1-201ENST00000423358 553 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 EI24P4-201ENST00000423683 1078 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 EIF1P3-201ENST00000423841 334 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 FTH1P1-201ENST00000437933 532 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AP000281.1-201ENST00000444036 316 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 SLC25A18P1-201ENST00000449385 454 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AL353691.1-201ENST00000451332 387 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AC010733.1-201ENST00000451515 401 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 Z92846.1-201ENST00000456203 268 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 RPS27AP17-201ENST00000463344 455 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 RN7SL547P-201ENST00000490793 290 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 RN7SL466P-201ENST00000497546 295 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 PHBP17-201ENST00000528576 541 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AC126177.5-201ENST00000549599 178 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 OR4T1P-201ENST00000554933 911 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AP005432.2-201ENST00000608162 586 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 OR6R2P-201ENST00000609216 300 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 uc_338.12-201ENST00000616344 181 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 MAPK10-304ENST00000641341 3984 ntBASIC4.76□□□□□ -1.65
HIPK4Q8NE63 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
HIPK4Q8NE63 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms