Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC005771.1-201ENST00000585581 349 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC005191.1-201ENST00000603950 358 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 RN7SL722P-201ENST00000617780 284 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 RN7SL565P-201ENST00000618246 284 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC008785.1-201ENST00000624475 456 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC007529.1-201ENST00000418574 2178 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 RNU1-14P-201ENST00000362759 152 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 RNA5SP447-201ENST00000363749 119 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 RNU1-85P-201ENST00000364127 164 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 SNORA37-201ENST00000384504 129 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC025750.1-201ENST00000399891 379 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 RN7SKP33-201ENST00000410942 340 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 RPL21P32-201ENST00000419877 477 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 FNDC3CP-201ENST00000420795 1155 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 RPS29P17-201ENST00000430795 166 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 OR9M1P-201ENST00000459641 921 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 RPS29P19-201ENST00000479709 171 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC006517.1-201ENST00000480485 328 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC106872.2-201ENST00000494303 480 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 FABP5P5-201ENST00000515537 406 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 RNA5SP49-201ENST00000516450 115 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC025881.1-201ENST00000518851 512 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC063950.1-201ENST00000552036 308 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AL389895.1-201ENST00000554127 252 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 MIR4528-201ENST00000577763 90 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC006566.1-201ENST00000608943 513 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC103710.4-201ENST00000609301 899 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AC068944.2-201ENST00000610373 403 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 AL589743.7-201ENST00000612637 233 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 U6atac.1-201ENST00000616025 117 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP4Q8N3C7 ASNSP1-201ENST00000518311 1939 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 OR4A15-201ENST00000314706 1035 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 MIR192-201ENST00000384915 110 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AL121972.1-201ENST00000402023 252 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 MIR1179-201ENST00000408703 91 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 RPS27AP7-201ENST00000422792 455 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 RPS27AP14-201ENST00000422868 454 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 RPL30P3-201ENST00000424262 333 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AL732292.1-201ENST00000426692 226 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC105402.2-201ENST00000438503 358 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 VN1R10P-201ENST00000447106 875 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 NPM1P49-201ENST00000448027 714 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 RPL39P6-201ENST00000448289 150 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 HMGB3P21-201ENST00000452483 547 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 FABP3P2-201ENST00000453169 399 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 RPL23AP24-201ENST00000458203 385 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 MEMO1P3-201ENST00000459811 302 ntBASIC3.87□□□□□ -1.79
CLIP4Q8N3C7 AC091564.1-201ENST00000464563 479 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms