Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 MT-TH-201ENST00000387441 69 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AL031679.1-201ENST00000400616 525 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 MTND4LP20-201ENST00000402379 270 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 TPMTP3-201ENST00000411928 735 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 RPS23P10-201ENST00000416185 486 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 RPL7P2-201ENST00000427639 268 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 PRELID3BP10-201ENST00000431957 584 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC127537.2-201ENST00000439258 465 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 HSPE1P28-201ENST00000443139 211 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AL359073.1-201ENST00000448036 403 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 RPL29P29-201ENST00000448725 423 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 RPL38P1-201ENST00000460914 211 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC093809.1-201ENST00000509155 340 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 FTH1P21-201ENST00000512179 511 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 MTND5P4-201ENST00000514978 288 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC090281.1-201ENST00000523019 276 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC092851.1-201ENST00000535964 478 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 HMGB3P26-201ENST00000560051 582 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AP005136.1-201ENST00000579765 429 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AP001004.1-201ENST00000582468 324 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AL355812.1-201ENST00000603215 216 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AL357080.1-201ENST00000617394 239 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 MIR7151-201ENST00000617477 60 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC073968.1-201ENST00000618594 637 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC233309.1-201ENST00000619522 751 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 Z69908.1-201ENST00000622603 247 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC092192.1-201ENST00000633154 1018 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 Y_RNA.77-201ENST00000362962 107 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 RNU6-952P-201ENST00000391164 108 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC007066.1-201ENST00000392902 381 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 RPL31P1-201ENST00000398116 372 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 RPS3AP26-201ENST00000398259 784 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 RPL23AP48-201ENST00000406913 488 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 RNU4-6P-201ENST00000410804 122 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 RPL7P8-201ENST00000411964 730 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 HSPE1P12-201ENST00000412576 301 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 RPL31P45-201ENST00000419532 356 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 MTCO2P5-201ENST00000422621 426 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 GLRXP1-201ENST00000423261 334 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC244035.1-201ENST00000430042 390 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AL831737.1-201ENST00000441288 271 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 MTND5P14-201ENST00000441481 1267 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC006011.1-201ENST00000442758 349 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 PAXBP1P1-201ENST00000449315 447 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 ZNF114P1-201ENST00000453500 292 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC146507.1-201ENST00000468335 354 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 RPL31P50-201ENST00000471002 296 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC087312.1-201ENST00000471411 480 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 VN1R105P-201ENST00000486595 910 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC109486.1-201ENST00000486833 374 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 OR5H5P-201ENST00000503164 928 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 BNIP3P41-201ENST00000503774 571 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 MTND4LP31-201ENST00000514859 294 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 NDUFA5P2-201ENST00000519723 344 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 AC068587.4-201ENST00000533893 186 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BEST3Q8N1M1 PCMTD1P2-201ENST00000565017 355 ntBASIC3.8□□□□□ -1.8
BEST3Q8N1M1 ROCK1P1-201ENST00000573767 549 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms