Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC104576.1-201ENST00000524225 88 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 MIR3189-201ENST00000578735 73 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AP001823.1-201ENST00000604056 1003 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AC002044.1-201ENST00000606707 158 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 SNORA74.4-201ENST00000607595 199 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AC006023.2-201ENST00000609916 167 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AL162377.2-201ENST00000624532 337 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC116Q8IYX3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC116Q8IYX3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC116Q8IYX3 AL122126.1-201ENST00000546905 1318 ntBASIC5.9□□□□□ -1.47
CCDC116Q8IYX3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC116Q8IYX3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC116Q8IYX3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC116Q8IYX3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC116Q8IYX3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.9□□□□□ -1.47
CCDC116Q8IYX3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC116Q8IYX3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 CASC19-246ENST00000641625 1606 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AL391987.6-201ENST00000305671 199 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 Y_RNA.54-201ENST00000362766 105 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 Y_RNA.352-201ENST00000365439 102 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 RNU6-1329P-201ENST00000365664 107 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 RNU6-637P-201ENST00000384050 107 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 RNU6-701P-201ENST00000384059 107 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AL157702.1-201ENST00000398764 426 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AL603910.2-201ENST00000407268 136 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 Y_RNA.793-201ENST00000411222 111 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 RPL12P17-201ENST00000432393 498 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 ATP5LP2-201ENST00000440646 311 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AC098869.1-201ENST00000481627 292 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 RNA5SP206-201ENST00000516703 121 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AC034114.1-201ENST00000520293 285 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 MIR4420-201ENST00000583944 77 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 NPIPB1P-202ENST00000588786 828 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AC116667.2-201ENST00000641075 823 ntBASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC116Q8IYX3 AL355834.1-201ENST00000556602 3965 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AC116667.1-201ENST00000604855 2072 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 PRELID1P1-201ENST00000403549 660 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AL139156.1-201ENST00000412785 841 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 RPS12P5-201ENST00000423449 371 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AC096920.1-201ENST00000423991 241 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 MRPS21P2-201ENST00000424704 264 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 RPS27AP3-201ENST00000453803 454 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 RN7SL326P-201ENST00000477493 296 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 SNORA31.6-201ENST00000516241 130 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 Y_RNA.687-201ENST00000516558 91 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AC009852.2-201ENST00000567898 485 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AC027229.1-201ENST00000583887 253 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AC012119.1-201ENST00000603184 222 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 MIR1244-1-201ENST00000612829 85 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AL512652.1-201ENST00000619006 500 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 MIR6811-201ENST00000620409 58 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 MIR6823-201ENST00000622118 61 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 MIR1244-3-201ENST00000635744 85 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 MIR1244-2-201ENST00000636449 85 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 MIR1244-4-202ENST00000636813 85 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms