Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AL390123.1-201ENST00000603216 237 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AC008162.1-201ENST00000604718 254 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AL670379.4-201ENST00000605279 254 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AC244100.1-202ENST00000621554 382 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 THAP12P9-201ENST00000503971 2360 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 RNU6-666P-201ENST00000363499 107 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 RNU6-47P-201ENST00000383866 107 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 Y_RNA.526-201ENST00000384572 110 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 RNU6-95P-201ENST00000384697 107 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 PTMAP6-201ENST00000439110 327 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 RPS7P5-201ENST00000441482 581 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 RPL36AP15-201ENST00000444514 266 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AL031274.1-201ENST00000450334 232 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 PABPC1P3-201ENST00000469174 459 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AC100832.1-201ENST00000471945 383 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AC055855.1-201ENST00000489563 579 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 SNORA31.6-201ENST00000516241 130 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AC021678.3-201ENST00000517893 476 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AC139365.2-201ENST00000517972 253 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 IGKV2-23-201ENST00000518729 323 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 PMS2P3-207ENST00000529061 717 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AC109446.1-201ENST00000566172 220 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AC005341.1-201ENST00000571086 708 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 MIR5692C1-201ENST00000585309 91 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AC008687.2-201ENST00000597865 520 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 HMGN2P28-201ENST00000606102 262 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 uc_338.12-201ENST00000616344 181 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 OFD1P17-201ENST00000437639 3018 ntBASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
NPAS3Q8IXF0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 SNORD62.1-201ENST00000362541 86 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 RN7SKP151-201ENST00000410230 316 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 RNU4-64P-201ENST00000410795 131 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AC097713.2-201ENST00000430199 356 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AC114495.1-201ENST00000441274 436 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AC245028.2-201ENST00000458673 253 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 RPL23AP41-201ENST00000484754 458 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AC110792.1-201ENST00000491826 472 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 RPS27AP18-201ENST00000515536 459 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 DYNLL1P4-201ENST00000549314 266 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AC018552.1-201ENST00000562099 811 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AC011477.5-201ENST00000586571 259 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AL161423.1-201ENST00000613700 262 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 MIR8080-201ENST00000622224 89 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AL357559.1-201ENST00000622228 274 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 U6.101-201ENST00000637707 76 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 AL391516.1-201ENST00000554380 2449 ntBASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NPAS3Q8IXF0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms