Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RGS17P1-201ENST00000423358 553 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 ATP5JP1-201ENST00000431631 322 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 BX323845.1-201ENST00000432417 179 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 RPL36AP53-201ENST00000432891 316 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 FTLP19-201ENST00000433300 394 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 RHOT1P3-201ENST00000436571 331 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC112498.1-201ENST00000444401 332 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 EEF1A1P1-201ENST00000447052 739 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 CACYBPP2-201ENST00000453625 678 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 RPS3AP41-201ENST00000462701 778 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC021146.1-201ENST00000511202 716 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC098976.1-201ENST00000513014 541 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC093853.1-201ENST00000515689 483 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AP006245.2-201ENST00000522004 300 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 PSMA2P1-201ENST00000526365 646 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 OR4R1P-201ENST00000529879 463 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 PDCD5P1-201ENST00000543528 309 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC010525.2-201ENST00000590920 195 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC068790.3-201ENST00000602988 553 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AP005432.2-201ENST00000608162 586 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AL132765.2-201ENST00000610812 351 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 AC022106.2-201ENST00000620114 757 ntBASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM48Q8IWZ4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC000374.1-201ENST00000434698 1745 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 RNU4-79P-201ENST00000362764 141 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 Y_RNA.157-201ENST00000363638 102 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 RNU6-108P-201ENST00000365558 107 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 RNU6-332P-201ENST00000391193 108 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 RPL32P23-201ENST00000397237 405 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AL122016.1-201ENST00000403365 367 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 ARL4AP5-201ENST00000404372 599 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AL162578.1-201ENST00000406202 378 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AL354719.1-201ENST00000406535 843 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 SNORA77-201ENST00000408716 125 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 OR2AM1P-201ENST00000422137 422 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC140076.1-201ENST00000449897 361 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC093278.1-201ENST00000494700 600 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC022690.1-201ENST00000526681 550 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC023050.3-201ENST00000541142 333 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 HMGB1P6-201ENST00000569046 646 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC025588.3-201ENST00000604182 274 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AL050343.2-201ENST00000607338 280 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC015908.5-201ENST00000623289 343 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AL159972.1-201ENST00000625150 448 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 AL592148.3-201ENST00000608771 2646 ntBASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM48Q8IWZ4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM48Q8IWZ4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms