Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC073346.2-201ENST00000624724 2058 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC087359.1-201ENST00000508335 1740 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AL391994.1-201ENST00000254724 282 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 RPL23AP57-201ENST00000332361 466 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC067945.1-201ENST00000342609 618 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 PTMAP5-201ENST00000393073 333 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 VN1R8P-201ENST00000407739 893 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 MTND2P18-201ENST00000419962 1030 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC019178.2-201ENST00000423595 505 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC093698.1-201ENST00000423843 571 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 TXNL1P1-201ENST00000429528 554 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 ZYG11AP1-201ENST00000430329 837 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AL365396.1-201ENST00000430854 671 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AL353748.1-201ENST00000440753 474 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 S100A11P1-201ENST00000477525 312 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC093534.1-201ENST00000504977 132 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC119751.5-201ENST00000514077 770 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 RNA5SP154-201ENST00000516193 111 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 OSBPL9P5-201ENST00000542581 171 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC090616.2-202ENST00000584248 222 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC015967.1-201ENST00000619893 476 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 CU459211.1-201ENST00000635667 749 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC011477.1-204ENST00000623416 1325 ntBASIC4.39□□□□□ -1.71
HERC6Q8IVU3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HERC6Q8IVU3 AC097504.1-201ENST00000515103 2415 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 Z82217.1-201ENST00000625157 8149 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 RNA5SP56-201ENST00000410277 118 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 RNU2-15P-201ENST00000410692 191 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 RNU4-72P-201ENST00000410754 173 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 PIGPP2-201ENST00000411569 458 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AC011233.1-201ENST00000422812 283 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AL593851.1-201ENST00000426171 157 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 PAXBP1P1-201ENST00000449315 447 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 ABCF2P2-201ENST00000450549 296 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 RPS11P1-201ENST00000451072 473 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 MEMO1P3-201ENST00000459811 302 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 BNIP3P41-201ENST00000503774 571 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 RNU6-352P-201ENST00000516908 107 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AC007834.2-201ENST00000536310 343 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AC069240.1-201ENST00000548774 375 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AL669831.4-202ENST00000590817 238 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AC015726.1-201ENST00000602353 681 ntBASIC4.38□□□□□ -1.71
HERC6Q8IVU3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AC004009.2-201ENST00000623016 728 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms