Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AL355375.2-201ENST00000574825 175 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 VN1R80P-201ENST00000597126 338 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AL022394.1-201ENST00000606979 292 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 uc_338.11-201ENST00000619132 160 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AC079684.1-201ENST00000621405 437 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC116667.1-201ENST00000604855 2072 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 Y_RNA.67-201ENST00000362870 100 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 RNU6-1068P-201ENST00000410958 103 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 VN1R36P-201ENST00000414936 291 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 DDX39BP1-205ENST00000422507 192 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AL360081.1-201ENST00000428299 555 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AL138799.3-201ENST00000438968 350 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC233279.1-201ENST00000455300 423 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 snoU13.20-201ENST00000459180 104 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 RPL5P22-201ENST00000480199 884 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC012400.1-201ENST00000518452 381 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC100870.1-201ENST00000522035 505 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 NCAPGP2-201ENST00000557911 754 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC037471.2-201ENST00000564941 598 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC018638.8-201ENST00000588755 281 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC011487.3-201ENST00000593607 453 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC087783.2-201ENST00000605070 562 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC116312.1-201ENST00000606841 314 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AC005858.4-201ENST00000623191 700 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AL136313.1-201ENST00000624804 202 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 U6.114-201ENST00000636407 96 ntBASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPAS4Q8IUM7 MTND5P3-201ENST00000438536 1800 ntBASIC5.71□□□□□ -1.49
NPAS4Q8IUM7 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
NPAS4Q8IUM7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPAS4Q8IUM7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPAS4Q8IUM7 GABPAP-201ENST00000419271 1356 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 Z73965.1-201ENST00000623412 2297 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 RNU6-1284P-201ENST00000363701 100 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AL136116.1-201ENST00000403591 381 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 RPL21P24-201ENST00000413752 448 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 UBE2FP1-201ENST00000416536 447 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC092651.1-201ENST00000426110 312 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 CBWD4P-201ENST00000445695 655 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC079168.1-201ENST00000458741 345 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 RPS27AP17-201ENST00000463344 455 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC092324.1-201ENST00000468671 324 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 RPS24P16-201ENST00000497294 392 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC139783.2-201ENST00000504847 1145 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 RNU6-1095P-201ENST00000516148 108 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC243972.3-201ENST00000539655 198 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 EDDM3DP-201ENST00000554692 434 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC068831.4-201ENST00000556118 109 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 AC010205.1-201ENST00000616668 449 ntBASIC5.71□□□□□ -1.5
NPAS4Q8IUM7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms