Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AL136372.1-201ENST00000403060 228 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AL354868.1-201ENST00000417077 482 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 EIF4EP1-201ENST00000422311 642 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 RPL7L1P9-201ENST00000431298 745 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AL161722.2-201ENST00000434731 981 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 RPL36AP6-201ENST00000435770 321 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 OSTCP8-201ENST00000445117 448 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 RNU1-88P-201ENST00000459274 128 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AP001992.1-205ENST00000462248 379 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AC072052.1-201ENST00000496556 306 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AC093767.1-201ENST00000504523 156 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 GAPDHP62-201ENST00000515313 990 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AC015720.2-201ENST00000567709 334 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AC106782.4-201ENST00000568264 210 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AC092447.9-201ENST00000603395 144 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 MIR8062-201ENST00000621515 85 ntBASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SH3RF1Q7Z6J0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 AC023421.1-201ENST00000590535 1785 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 RNA5SP453-201ENST00000362503 119 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 RHOT1P2-201ENST00000366423 333 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 RNU6-823P-201ENST00000391042 103 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 RPL7P46-201ENST00000425129 740 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 AC005726.1-201ENST00000494679 427 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 PGAM1P13-201ENST00000507497 754 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 AC104806.1-201ENST00000508720 308 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 RNU6-475P-201ENST00000516073 104 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 AC124068.1-201ENST00000563131 678 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 MIR3910-1-201ENST00000580936 111 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 AL031320.1-201ENST00000604177 357 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 AC068870.2-201ENST00000620635 389 ntBASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SH3RF1Q7Z6J0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 TPTE2P4-201ENST00000258589 1605 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 RNU6-266P-201ENST00000364225 107 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 Y_RNA.350-201ENST00000365409 98 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 MIR130A-201ENST00000385274 89 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 Y_RNA.594-201ENST00000410373 140 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AC236972.1-201ENST00000433225 199 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 PSMD10P3-201ENST00000437000 448 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 HMGB3P21-201ENST00000452483 547 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 RNU7-59P-201ENST00000459101 61 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms