Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 AC092470.1-201ENST00000546187 132 ntBASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 AC005261.5-201ENST00000596280 355 ntBASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 RPL26P30-202ENST00000602923 645 ntBASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 AL031119.1-201ENST00000404707 1879 ntBASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
RUFY4Q6ZNE9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 RNY3P3-201ENST00000363816 102 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 Y_RNA.279-201ENST00000364763 95 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AL035079.1-201ENST00000405210 287 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AL356967.1-201ENST00000406305 431 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 MIR1271-201ENST00000408537 86 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 RN7SKP100-201ENST00000411258 284 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 PSMA6P3-201ENST00000428242 164 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 C4BPAP2-201ENST00000428434 478 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 DNAJC19P7-201ENST00000428811 344 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 OR2B7P-201ENST00000429302 934 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 RPL7P54-201ENST00000438336 674 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 SEPT14P3-201ENST00000439401 183 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AL732372.2-207ENST00000445840 183 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 SEPT14P2-201ENST00000453405 183 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 RAD23BP3-201ENST00000454157 1152 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 RPS4XP18-201ENST00000495480 763 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 HMGB3P16-201ENST00000508037 287 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 SEPT14P4-201ENST00000513445 186 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 FO082796.1-201ENST00000523795 183 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AP001880.2-201ENST00000538233 448 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AC018552.3-201ENST00000567416 561 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AL512782.1-201ENST00000603093 364 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AC112230.1-201ENST00000604342 547 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AL355472.4-201ENST00000610233 626 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AC079597.1-201ENST00000624306 508 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 AC107027.3-201ENST00000565095 3473 ntBASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RUFY4Q6ZNE9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 LINC00622-201ENST00000562811 1570 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 CKAP2P1-201ENST00000555477 2049 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 RNU6-97P-201ENST00000363387 104 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 RNU1-32P-201ENST00000363937 159 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 Y_RNA.234-201ENST00000364409 97 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 SNORA62-201ENST00000365493 153 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 RNU6-1207P-201ENST00000384343 107 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 RNU6-456P-201ENST00000384493 107 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 U3.20-201ENST00000390909 217 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 SNRPFP1-201ENST00000414761 252 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AC016831.2-201ENST00000417179 352 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AC019097.1-201ENST00000424783 735 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AL035410.1-201ENST00000427409 427 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AC091390.1-201ENST00000433904 331 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 UBE2V1P13-201ENST00000436983 439 ntBASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.47□□□□□ -1.53
RUFY4Q6ZNE9 RPL7P52-201ENST00000449200 742 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 227.5 ms