Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 RPL30P2-201ENST00000414021 291 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 SKA2P1-201ENST00000425592 390 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 NPM1P18-201ENST00000434232 732 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 RPL21P112-201ENST00000434403 463 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 SNRPEP4-201ENST00000435815 279 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 GAPDHP48-201ENST00000436626 961 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 EIF5AP4-201ENST00000441206 465 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 MED28P3-201ENST00000444288 531 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 SCARNA18-201ENST00000459004 134 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 PTP4A1P4-201ENST00000512479 322 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 AC005798.1-201ENST00000513715 387 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 RN7SKP277-201ENST00000516895 283 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 OR5D15P-201ENST00000531671 942 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 AF038458.1-201ENST00000588406 262 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 AC104687.2-201ENST00000604442 342 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 AC098657.3-201ENST00000620434 263 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 AL445363.3-201ENST00000623080 671 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 AL359922.3-201ENST00000624779 1670 ntBASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
LRFN4Q6PJG9 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AC027287.1-201ENST00000553115 1453 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AC005005.4-201ENST00000623789 16698 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AL360270.2-201ENST00000562952 5985 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 XIAPP3-201ENST00000312918 795 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 RNU1-150P-201ENST00000362491 162 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 RNU6-593P-201ENST00000364716 112 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 SNORD116-11-201ENST00000383882 92 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 RNU6-601P-201ENST00000384540 107 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 SNORA11.5-201ENST00000408163 128 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 RNU4-65P-201ENST00000410473 140 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 RPL21P24-201ENST00000413752 448 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 MRPL53P1-201ENST00000414323 319 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 ATG3P1-201ENST00000419507 911 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AL590609.2-201ENST00000421430 368 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 RPL31P12-201ENST00000422587 358 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 RAC1P6-201ENST00000423911 575 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 BX323845.3-201ENST00000428215 527 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 RPL23AP89-201ENST00000439324 255 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AC116533.1-201ENST00000459748 321 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AL135752.1-201ENST00000479477 471 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 RNA5SP230-201ENST00000517039 122 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 RNU6-685P-201ENST00000517088 95 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 RN7SKP295-201ENST00000517264 153 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AP000648.1-201ENST00000529682 397 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 SNHG22-203ENST00000617833 660 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 CYP4F35P-202ENST00000636121 390 ntBASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
LRFN4Q6PJG9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms