Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC068050.1-201ENST00000394891 380 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 TMSB4XP8-201ENST00000402089 135 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 RNU6-603P-201ENST00000411403 107 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 TMSB4XP6-201ENST00000415187 135 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC140479.3-201ENST00000418944 1126 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 TMSB4XP1-201ENST00000424567 135 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 MTCO3P46-201ENST00000425787 232 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 RPS27AP6-201ENST00000427962 448 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 RPS17P8-201ENST00000434525 335 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 RPL17P49-201ENST00000443728 411 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC015724.1-201ENST00000478577 156 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AP001781.1-201ENST00000530977 207 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 OR5B19P-201ENST00000531766 928 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 MIR1254-2-201ENST00000579553 63 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC007792.1-201ENST00000623023 402 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 AC100810.6-201ENST00000638068 285 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 MUC2-202ENST00000613187 4845 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 USP9YP4-201ENST00000424401 1745 ntBASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CNKSR3Q6P9H4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC140134.1-201ENST00000511830 3544 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AL512646.1-201ENST00000269395 1077 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 Y_RNA.146-201ENST00000363549 102 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 RNU1-39P-201ENST00000383897 165 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 RNU6-474P-201ENST00000384243 107 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 Y_RNA.474-201ENST00000384341 102 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 RNU1-82P-201ENST00000390851 165 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 RPL32P23-201ENST00000397237 405 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AL591848.1-201ENST00000413092 322 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 RPL35AP12-201ENST00000425362 338 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 RPL7P12-201ENST00000446719 750 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 NF1P3-201ENST00000457709 450 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 RPL7AP28-201ENST00000464513 571 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 RPL7P19-201ENST00000469948 618 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC083798.1-201ENST00000472671 131 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 RN7SL558P-201ENST00000497468 299 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC006499.2-201ENST00000513470 337 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC015795.1-201ENST00000513669 327 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC027309.2-201ENST00000520566 192 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AP003181.2-201ENST00000528941 181 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC006116.10-201ENST00000591836 581 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC008638.3-201ENST00000603341 463 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AC136443.5-201ENST00000603741 370 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AL031595.2-201ENST00000624215 19071 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 AL118496.1-201ENST00000440201 1812 ntBASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNKSR3Q6P9H4 DBF4P1-201ENST00000412976 1892 ntBASIC5.17□□□□□ -1.58
CNKSR3Q6P9H4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms