Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 VN1R79P-201ENST00000593540 513 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 BNIP3P8-201ENST00000597863 560 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.02□□□□□ -1.61
KRT40Q6A162 IPO5P1-202ENST00000600039 287 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 AL354984.3-201ENST00000604803 325 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 AC090578.1-201ENST00000604955 591 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT40Q6A162 AP001005.3-201ENST00000622049 129 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 AC019278.1-201ENST00000623516 479 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT40Q6A162 AC124864.2-201ENST00000624736 186 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.02□□□□□ -1.61
KRT40Q6A162 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
KRT40Q6A162 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
KRT40Q6A162 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.02□□□□□ -1.61
KRT40Q6A162 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.02□□□□□ -1.61
KRT40Q6A162 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
KRT40Q6A162 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRT40Q6A162 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
KRT40Q6A162 DCAF13P1-201ENST00000495256 1330 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 MAPK10-349ENST00000641767 3661 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRT40Q6A162 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.01□□□□□ -1.61
KRT40Q6A162 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.01□□□□□ -1.61
KRT40Q6A162 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRT40Q6A162 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRT40Q6A162 MIR1277-201ENST00000408536 78 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.01□□□□□ -1.61
KRT40Q6A162 Y_RNA.598-201ENST00000410480 95 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AC073264.1-201ENST00000411508 416 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AC234782.4-201ENST00000417646 1048 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 MTCYBP24-201ENST00000420387 1106 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 RPL7P30-201ENST00000420888 709 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AC007742.1-201ENST00000425789 329 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.01□□□□□ -1.61
KRT40Q6A162 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.01□□□□□ -1.61
KRT40Q6A162 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
KRT40Q6A162 AC010881.1-201ENST00000433830 235 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AL132765.1-201ENST00000434165 553 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRT40Q6A162 ELOCP26-201ENST00000436067 329 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 SNRPEP8-201ENST00000442866 260 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.01□□□□□ -1.61
KRT40Q6A162 NFU1P2-201ENST00000448700 469 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 RPL21P6-201ENST00000479171 504 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AC005912.1-201ENST00000495392 255 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 FCF1P3-201ENST00000496394 590 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 NDUFB4P2-201ENST00000509515 391 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AC015795.1-201ENST00000513669 327 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.01□□□□□ -1.61
KRT40Q6A162 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.01□□□□□ -1.61
KRT40Q6A162 RNU1-45P-201ENST00000517191 141 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.01□□□□□ -1.61
KRT40Q6A162 PHBP17-201ENST00000528576 541 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.01□□□□□ -1.61
KRT40Q6A162 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.01□□□□□ -1.61
KRT40Q6A162 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.01□□□□□ -1.61
KRT40Q6A162 PRELID3BP8-201ENST00000604148 295 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AC112191.3-201ENST00000604371 277 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AC097468.3-201ENST00000607956 456 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.01□□□□□ -1.61
KRT40Q6A162 AC243773.3-201ENST00000613270 256 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AL021997.2-201ENST00000615674 271 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AL158209.2-201ENST00000619266 216 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 AC136475.10-201ENST00000620253 385 ntBASIC5.01□□□□□ -1.61
KRT40Q6A162 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
KRT40Q6A162 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
KRT40Q6A162 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
KRT40Q6A162 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRT40Q6A162 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
KRT40Q6A162 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
KRT40Q6A162 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRT40Q6A162 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRT40Q6A162 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRT40Q6A162 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.01□□□□□ -1.61
KRT40Q6A162 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRT40Q6A162 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRT40Q6A162 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
KRT40Q6A162 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
KRT40Q6A162 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
KRT40Q6A162 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5□□□□□ -1.61
KRT40Q6A162 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
KRT40Q6A162 AC022031.1-201ENST00000585985 2593 ntBASIC5□□□□□ -1.61
KRT40Q6A162 Y_RNA.450-201ENST00000384198 113 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AL121972.1-201ENST00000402023 252 ntBASIC5□□□□□ -1.61
KRT40Q6A162 CCNG1P1-201ENST00000406783 885 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC011933.1-201ENST00000413334 321 ntBASIC5□□□□□ -1.61
KRT40Q6A162 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5□□□□□ -1.61
KRT40Q6A162 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5□□□□□ -1.61
KRT40Q6A162 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5□□□□□ -1.61
KRT40Q6A162 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5□□□□□ -1.61
KRT40Q6A162 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5□□□□□ -1.61
KRT40Q6A162 RPS26P40-201ENST00000435209 294 ntBASIC5□□□□□ -1.61
KRT40Q6A162 RPS3AP54-201ENST00000435535 734 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms