Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AC008694.2-201ENST00000517591 306 ntBASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 HMGN1P28-201ENST00000521340 364 ntBASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 AC109635.3-201ENST00000529536 185 ntBASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 AP006289.1-201ENST00000538089 277 ntBASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 AK6P1-201ENST00000540219 478 ntBASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 AC025678.1-201ENST00000567861 338 ntBASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 AL136363.1-201ENST00000605349 337 ntBASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 AC008966.2-201ENST00000606157 453 ntBASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 AC017083.3-201ENST00000609955 700 ntBASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 TUG1_1.1-201ENST00000610654 145 ntBASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.97□□□□□ -1.61
FNDC3BQ53EP0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.96□□□□□ -1.61
FNDC3BQ53EP0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
FNDC3BQ53EP0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
FNDC3BQ53EP0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.96□□□□□ -1.61
FNDC3BQ53EP0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 LINC00622-201ENST00000562811 1570 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AC104118.1-201ENST00000607625 1589 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 OR1S2-201ENST00000302592 978 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 RNU6-1249P-201ENST00000363237 111 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 RNA5SP505-201ENST00000364748 108 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 RPS4XP9-201ENST00000405151 780 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AC114755.2-201ENST00000413520 361 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 OR1AA1P-201ENST00000419597 916 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AC009480.2-201ENST00000422916 432 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 NRBF2P3-201ENST00000432731 865 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 HMGB3P12-201ENST00000438745 556 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AL662791.1-201ENST00000441992 928 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 TMEM248P1-201ENST00000510579 951 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AC103783.1-201ENST00000520506 373 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 MTND1P35-201ENST00000526739 508 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AP000857.1-201ENST00000532151 543 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AL512310.1-201ENST00000548639 172 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AC079075.1-201ENST00000559543 878 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AC067959.1-201ENST00000604334 379 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AL161637.1-201ENST00000622380 412 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 CR381572.2-201ENST00000624852 397 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 AL138713.1-201ENST00000624026 2130 ntBASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FNDC3BQ53EP0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 AC009951.1-201ENST00000623674 2614 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 RNU6-867P-201ENST00000364956 107 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 RNU6-169P-201ENST00000365336 107 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 RNU6-432P-201ENST00000384196 109 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 RPL21P67-201ENST00000402896 478 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 AC016397.1-201ENST00000412463 242 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 AC119751.6-201ENST00000416712 186 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 MTATP6P18-201ENST00000417994 673 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 FABP7P1-201ENST00000424004 391 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 AC092162.1-201ENST00000432828 434 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 GPR143P-201ENST00000434155 205 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 MRPS18BP2-201ENST00000434310 759 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 AC010655.1-201ENST00000449336 292 ntBASIC4.95□□□□□ -1.62
FNDC3BQ53EP0 AC140076.1-201ENST00000449897 361 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms