Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL132765.1-201ENST00000434165 553 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AL138878.2-201ENST00000440581 1241 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC38Q502W7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC38Q502W7 RPL30P9-201ENST00000465586 330 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 HMGB1P36-201ENST00000487709 576 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CCDC38Q502W7 AC017037.1-201ENST00000508460 471 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC38Q502W7 RNU6-714P-201ENST00000516963 103 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 RN7SKP92-201ENST00000517266 244 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC38Q502W7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC38Q502W7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC38Q502W7 AP004247.1-201ENST00000531556 1289 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC38Q502W7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC38Q502W7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC38Q502W7 BNIP3P23-201ENST00000599655 511 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 WISP1-OT1-201ENST00000602893 642 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AL354984.3-201ENST00000604803 325 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AC107214.2-201ENST00000608204 634 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AC092192.1-201ENST00000633154 1018 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 CU459211.1-201ENST00000635667 749 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC38Q502W7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC38Q502W7 AC008725.1-201ENST00000605123 2263 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC38Q502W7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC38Q502W7 MTND4P16-201ENST00000466108 1367 ntBASIC4.39□□□□□ -1.71
CCDC38Q502W7 AL365440.1-201ENST00000436135 2167 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC38Q502W7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC38Q502W7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC38Q502W7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC38Q502W7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC38Q502W7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC38Q502W7 XIAPP3-201ENST00000312918 795 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 MIR331-201ENST00000362302 94 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 RNA5SP167-201ENST00000365461 116 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 RNU6-629P-201ENST00000384061 103 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 MTCO1P17-201ENST00000411522 491 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC099677.1-201ENST00000420575 175 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 RPS3AP54-201ENST00000435535 734 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AF228730.2-201ENST00000438784 848 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 RPL23AP89-201ENST00000439324 255 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 Z83846.1-201ENST00000446798 265 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC009220.1-201ENST00000451614 275 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 Z82190.1-201ENST00000454534 490 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 MTND2P28-201ENST00000457540 1044 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 RN7SL585P-201ENST00000470538 280 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 RN7SL860P-201ENST00000473738 223 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 RN7SL459P-201ENST00000481078 302 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 AP001025.2-201ENST00000490908 477 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC092045.1-201ENST00000495716 1231 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC104164.2-201ENST00000496953 495 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC021678.1-201ENST00000505195 936 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC38Q502W7 MTCYBP41-201ENST00000528913 1123 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC012182.1-201ENST00000570133 895 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC011260.1-201ENST00000578420 472 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 MIR3915-201ENST00000578518 97 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 XIAPP1-201ENST00000603162 600 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC012669.1-201ENST00000603209 283 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC112187.2-201ENST00000604345 283 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AL021997.2-201ENST00000615674 271 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC007546.1-201ENST00000619452 559 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 C2orf27A-204ENST00000623058 969 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC091931.1-201ENST00000623488 728 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC008785.1-201ENST00000624475 456 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 AC007494.3-201ENST00000624660 743 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC38Q502W7 MFSD8-216ENST00000641147 4009 ntBASIC4.38□□□□□ -1.71
CCDC38Q502W7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC38Q502W7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC38Q502W7 CR383658.2-201ENST00000547576 1525 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms