Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 FABP7P2-201ENST00000429946 379 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 RPL12P17-201ENST00000432393 498 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 CYCSP12-201ENST00000437729 300 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AC105402.2-201ENST00000438503 358 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 MED28P3-201ENST00000444288 531 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH1Q08174 MIR2053-201ENST00000459295 91 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH1Q08174 RPS23P6-201ENST00000466136 431 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 RN7SL188P-201ENST00000469842 285 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH1Q08174 RFPL4AP5-201ENST00000514977 504 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 RNU6-123P-201ENST00000516163 102 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 RNU6-64P-201ENST00000517119 105 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 HMGB1P19-201ENST00000517578 577 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH1Q08174 PTP4A1P6-201ENST00000531034 478 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH1Q08174 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH1Q08174 OR11H5P-201ENST00000554039 926 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AC124068.1-201ENST00000563131 678 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AC138761.3-201ENST00000579993 334 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AC123786.2-201ENST00000603459 275 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AL008729.2-201ENST00000606393 473 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AC011373.1-201ENST00000607270 237 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AC005014.2-201ENST00000607795 599 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AC012409.4-201ENST00000612923 249 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
PCDH1Q08174 AC098657.3-201ENST00000620434 263 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 AC055839.1-201ENST00000634467 498 ntBASIC5.43□□□□□ -1.54
PCDH1Q08174 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH1Q08174 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH1Q08174 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH1Q08174 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH1Q08174 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH1Q08174 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH1Q08174 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH1Q08174 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH1Q08174 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH1Q08174 AL049641.1-201ENST00000441055 1948 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH1Q08174 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDH1Q08174 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDH1Q08174 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH1Q08174 RNU6-188P-201ENST00000364207 107 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 RNU6-1078P-201ENST00000364522 103 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 RN7SKP69-201ENST00000365390 305 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 RNU6-505P-201ENST00000384427 107 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 AC093155.2-201ENST00000420734 937 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDH1Q08174 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDH1Q08174 RPL7P46-201ENST00000425129 740 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 HMGB3P24-201ENST00000433260 622 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDH1Q08174 AL731563.1-201ENST00000442202 214 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PCDH1Q08174 RPL36AP13-201ENST00000457490 317 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 UBA52P7-201ENST00000486088 380 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDH1Q08174 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
PCDH1Q08174 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDH1Q08174 AC104806.1-201ENST00000508720 308 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH1Q08174 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDH1Q08174 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDH1Q08174 RANP9-201ENST00000519957 271 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH1Q08174 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDH1Q08174 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH1Q08174 AC092121.1-201ENST00000569452 202 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH1Q08174 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH1Q08174 AC074140.1-201ENST00000621617 208 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH1Q08174 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH1Q08174 ZNF734P-201ENST00000419494 1534 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH1Q08174 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.42□□□□□ -1.54
PCDH1Q08174 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PCDH1Q08174 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH1Q08174 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PCDH1Q08174 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH1Q08174 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PCDH1Q08174 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH1Q08174 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
PCDH1Q08174 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH1Q08174 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH1Q08174 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH1Q08174 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms