Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC073055.1-201ENST00000456901 1621 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS1Q01581 AC010733.2-201ENST00000589496 5702 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS1Q01581 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HMGCS1Q01581 AC093010.3-201ENST00000570269 15214 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HMGCS1Q01581 MTCO1P6-201ENST00000481192 1384 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HMGCS1Q01581 SNORA51.12-201ENST00000384448 134 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 SNORA48.8-201ENST00000391324 134 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 RPL23AP47-201ENST00000408017 460 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 TOMM22P1-201ENST00000418578 312 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 MTCYBP24-201ENST00000420387 1106 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 AL158156.1-201ENST00000422509 473 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCS1Q01581 AL009174.1-201ENST00000426577 416 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 AC005300.1-201ENST00000428401 373 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 AC005326.1-201ENST00000429197 123 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 AC000041.1-201ENST00000439655 175 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.03□□□□□ -1.92
HMGCS1Q01581 CDC42P1-201ENST00000456658 548 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.03□□□□□ -1.92
HMGCS1Q01581 RN7SL601P-201ENST00000471221 293 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 RPL32P34-201ENST00000486380 400 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 AC093278.1-201ENST00000494700 600 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HMGCS1Q01581 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCS1Q01581 AC112198.4-201ENST00000515450 351 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.03□□□□□ -1.92
HMGCS1Q01581 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCS1Q01581 SERPINE4P-201ENST00000554978 281 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.03□□□□□ -1.92
HMGCS1Q01581 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCS1Q01581 EIF5A2P1-201ENST00000564027 460 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.03□□□□□ -1.92
HMGCS1Q01581 AC006023.2-201ENST00000609916 167 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 AC099778.2-201ENST00000610904 211 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HMGCS1Q01581 AL121594.5-201ENST00000631724 573 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.03□□□□□ -1.92
HMGCS1Q01581 AC007256.1-201ENST00000392253 2765 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGCS1Q01581 PABPC1P7-201ENST00000413177 1513 ntBASIC3.03□□□□□ -1.92
HMGCS1Q01581 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 AC025263.3-201ENST00000622965 1396 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCS1Q01581 SAGE4P-201ENST00000442271 3381 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCS1Q01581 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCS1Q01581 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCS1Q01581 RNU6-468P-201ENST00000384003 109 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 AL357075.1-201ENST00000404107 726 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 AC245054.2-201ENST00000415639 319 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCS1Q01581 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 RPL36P19-201ENST00000430744 301 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 AC108734.1-201ENST00000439549 399 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 RPS12P18-201ENST00000442381 270 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 RPL5P24-201ENST00000463742 885 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 AL358832.1-201ENST00000497800 389 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCS1Q01581 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 AC023825.1-201ENST00000566704 1030 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 CKS1BP3-201ENST00000600888 237 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 AC013468.1-201ENST00000608680 598 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 AC006249.1-201ENST00000621223 471 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 AC018816.2-201ENST00000621460 353 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCS1Q01581 AC116096.1-201ENST00000566804 2314 ntBASIC3.02□□□□□ -1.93
HMGCS1Q01581 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS1Q01581 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS1Q01581 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 SNORD46.1-201ENST00000364139 104 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 RNU6-353P-201ENST00000364266 108 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 SNORA46-201ENST00000384762 135 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 TAF9BP1-201ENST00000396646 746 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AL583834.1-201ENST00000406943 343 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 MIR1250-201ENST00000408098 113 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 RNA5SP120-201ENST00000410900 112 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 RNU2-71P-201ENST00000411395 189 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms