Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.39□□□□□ -1.71
NKX6-1P78426 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX6-1P78426 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX6-1P78426 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX6-1P78426 AL356489.2-201ENST00000566968 3528 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX6-1P78426 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NKX6-1P78426 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NKX6-1P78426 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NKX6-1P78426 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
NKX6-1P78426 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX6-1P78426 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX6-1P78426 RPL32P3-201ENST00000359025 275 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 RNU5E-1-201ENST00000362477 120 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX6-1P78426 MIR548F1-201ENST00000408667 84 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 RNU4-55P-201ENST00000410731 137 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 RN7SKP247-201ENST00000411094 308 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX6-1P78426 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX6-1P78426 MTND3P17-201ENST00000416968 344 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.38□□□□□ -1.71
NKX6-1P78426 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX6-1P78426 RPS15AP12-201ENST00000419498 388 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 AL137014.1-201ENST00000420490 1226 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 AC104333.2-201ENST00000422630 192 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
NKX6-1P78426 AC073464.1-201ENST00000429823 534 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX6-1P78426 AC104850.1-201ENST00000435940 476 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 RHOT1P3-201ENST00000436571 331 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 AL451074.3-201ENST00000437709 472 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 AC093156.1-201ENST00000440382 670 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 OR7E125P-201ENST00000443450 846 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 CYCSP24-201ENST00000445119 316 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX6-1P78426 AC079448.1-201ENST00000449377 373 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 FABP3P2-201ENST00000453169 399 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 AL513533.1-201ENST00000453728 415 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 MTND1P12-201ENST00000455231 147 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 RN7SL443P-201ENST00000464331 290 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX6-1P78426 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 RNU6-1178P-201ENST00000516674 107 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 RNU6-798P-201ENST00000516912 103 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 AC107934.1-201ENST00000522215 217 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX6-1P78426 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.38□□□□□ -1.71
NKX6-1P78426 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX6-1P78426 AC022884.2-201ENST00000578535 580 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 AC006254.3-201ENST00000603353 884 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 AC007038.2-201ENST00000608095 740 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX6-1P78426 AC083809.1-201ENST00000615051 472 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 MIR6780A-201ENST00000615089 68 ntBASIC4.38□□□□□ -1.71
NKX6-1P78426 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX6-1P78426 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX6-1P78426 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX6-1P78426 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX6-1P78426 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.38□□□□□ -1.71
NKX6-1P78426 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NKX6-1P78426 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.38□□□□□ -1.71
NKX6-1P78426 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NKX6-1P78426 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.38□□□□□ -1.71
NKX6-1P78426 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX6-1P78426 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NKX6-1P78426 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NKX6-1P78426 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX6-1P78426 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NKX6-1P78426 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NKX6-1P78426 RNU5A-8P-201ENST00000364102 114 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 RNY4P16-201ENST00000364768 94 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 RNA5SP428-201ENST00000365129 132 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 SNORA2.3-201ENST00000383920 135 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 SNORA20.2-201ENST00000383922 131 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 Y_RNA.548-201ENST00000384656 105 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NKX6-1P78426 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX6-1P78426 RNU6-516P-201ENST00000411381 104 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX6-1P78426 BEND7P1-201ENST00000422058 457 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 BX323845.1-201ENST00000432417 179 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX6-1P78426 TIMM9P1-201ENST00000436122 256 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 RPL35AP22-201ENST00000436855 335 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 UBE2V1P8-201ENST00000437166 265 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 HMGB3P9-201ENST00000441799 583 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 AL121871.1-201ENST00000443413 436 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX6-1P78426 AL354714.3-201ENST00000447284 493 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 RPS17P13-201ENST00000448974 407 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 RPS23P7-201ENST00000466210 444 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 AC006967.1-201ENST00000467608 589 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 AC022795.1-201ENST00000473808 480 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 AC023194.1-201ENST00000493084 308 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX6-1P78426 AC109927.2-201ENST00000506416 303 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 SAP18P1-201ENST00000512058 390 ntBASIC4.37□□□□□ -1.71
NKX6-1P78426 RNA5SP43-201ENST00000516559 110 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms